DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8419 and trim2

DIOPT Version :9

Sequence 1:NP_609193.1 Gene:CG8419 / 34118 FlyBaseID:FBgn0031999 Length:921 Species:Drosophila melanogaster
Sequence 2:NP_001005680.1 Gene:trim2 / 448181 XenbaseID:XB-GENE-942459 Length:760 Species:Xenopus tropicalis


Alignment Length:601 Identity:118/601 - (19%)
Similarity:188/601 - (31%) Gaps:200/601 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 LKCGICLDVYTDPRTLHCLHSFCLQCLVSENFKDESLWDQDQARSEEPSNYSLRSEMGGSSAELT 370
            |.|.||||.|.:|:.|.|||:||.:||                     .||              
 Frog    21 LICSICLDRYKNPKVLPCLHTFCERCL---------------------QNY-------------- 50

  Fly   371 ATVSPARQRGSSFTLRRKKSMDRLVIRSKSDGKRSTSSIGTRFTGSFASEVSTRCIRCHTCNYPT 435
               .||.    |.||                                         .|..|...:
 Frog    51 ---IPAH----SLTL-----------------------------------------SCPVCRQTS 67

  Fly   436 DLSLGGVRQLPQNYLLVRRIEVLRLQAGEDVISRVWCSLCTEEISATYHCISCTLNLCTLCKEAH 500
            .|...||..|..|:.:...::||                                          
 Frog    68 ILPEKGVSALQNNFFITNLMDVL------------------------------------------ 90

  Fly   501 ERQRSTASHRMRSILELRRARKQKQQQMGLGDSSKL----------VLRCGIHTNFELKAFCTNC 555
                                  |:....|:.:||.|          .|.|..|....::.:|.:|
 Frog    91 ----------------------QRSPDNGIEESSILETVSAVAAGKPLSCPNHDGNVMEFYCQSC 133

  Fly   556 RQLACTDCLVILHKGHRHETISRAIGHQGKLLKEATDQTRPLCQYAEHSIERLNAIARGINDRCD 620
            ....|.||....|..|....:...:......|:...|..:......:.:::.::.|...:..:..
 Frog   134 ETAMCQDCTGGEHAEHPTVPLKDVVEQHKAALQAQLDAVKKRLPEIDSALQCVSEIVNQLASQKT 198

  Fly   621 DIQTQVERYMQQYMDALTVHRKTLLQQISRARESKVEV-------VLKQQLDLEKRTQQAM-DAV 677
            .|..::..........|.|.:..||.::        ||       ||:.|||.....|::: ...
 Frog   199 SIVEEIHSTFDDLQKTLNVRKSVLLMEL--------EVNYGLKHKVLQAQLDTLIEGQESIKSCT 255

  Fly   678 RFSQELCEIGADVEILSYVTILLRRLEYCQQFKPPVDPKISDSLHFLPKIRAPSTKDQRDIPLYG 742
            .|:.:....|.:.|:|.....:..:|....:...|:.|..:|.|.|:  :.....|  :.|...|
 Frog   256 TFTAQALNHGTETEVLLVKKQMSDKLNELAEQDFPLQPHENDQLDFI--VETEGLK--KSIHNLG 316

  Fly   743 II--TMQVVEPSLCTLEWEGFSQLRLHKKADLLLHSRDADGVSLCH-GGLEINCMLKYKDSSSKF 804
            .|  |..|...::.|  .||..|..:.:...:.:.::|.|| .||. |...|:..|...|.|  .
 Frog   317 TILTTNAVASETVAT--GEGLRQSVIGQPMSVTITTKDKDG-ELCKTGSAYISAELFTPDGS--V 376

  Fly   805 LPVEVSDNRDGTYNISFTPDAQGTLILTITINDRPIKGGPF---TFQARQVRPHT-GIYHCCSFC 865
            ...||.||::|||..|:|...:|...|::.:.|:.|||.||   ..::..|.|.| |:       
 Frog   377 TDGEVVDNKNGTYEFSYTIPTEGDFTLSLRLYDQHIKGSPFKLKVVKSADVSPTTEGV------- 434

  Fly   866 SGKGNRNVMCSCEGHM 881
                .|.|.....||:
 Frog   435 ----KRRVKSPGSGHV 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8419NP_609193.1 RING 308..>334 CDD:214546 15/25 (60%)
zf-B_box 537..576 CDD:279037 10/38 (26%)
iSH2_PI3K_IA_R 583..703 CDD:304922 20/127 (16%)
Filamin 748..846 CDD:279024 32/101 (32%)
IG_FLMN 751..849 CDD:214720 31/101 (31%)
trim2NP_001005680.1 RING 23..66 CDD:238093 24/125 (19%)
BBOX 113..154 CDD:197662 10/40 (25%)
BBC 161..287 CDD:128778 21/133 (16%)
IG_FLMN 325..421 CDD:214720 31/100 (31%)
Filamin 325..418 CDD:279024 30/97 (31%)
NHL_TRIM2_like 483..760 CDD:271330
NHL repeat 501..540 CDD:271330
YncE 547..>751 CDD:225926
NHL repeat 548..587 CDD:271330
NHL repeat 590..627 CDD:271330
NHL repeat 634..679 CDD:271330
NHL repeat 685..727 CDD:271330
NHL repeat 730..756 CDD:271330
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489543at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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