DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8419 and Trim55

DIOPT Version :10

Sequence 1:NP_609193.1 Gene:CG8419 / 34118 FlyBaseID:FBgn0031999 Length:921 Species:Drosophila melanogaster
Sequence 2:NP_001012218.1 Gene:Trim55 / 365751 RGDID:1306943 Length:545 Species:Rattus norvegicus


Alignment Length:457 Identity:90/457 - (19%)
Similarity:158/457 - (34%) Gaps:177/457 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 SPSITLRPSTPPENTVIFTDDLK----CGICLDVYTDPRT-LHCLHSFCLQCLVSENFKDESLWD 344
            |.|:..:..:..:.|:   |:|:    |.|||:::|.|.. |.|.|:.|.:| .|:.|       
  Rat     2 STSLNYKSFSKEQQTM---DNLEKQLICPICLEMFTKPVVILPCQHNLCRKC-ASDIF------- 55

  Fly   345 QDQARSEEPSNYSLRSEMGGSSAELTATVSPARQRGSSFTLRRKKSMDRLVIRSKSDGKRSTSSI 409
                   :.||..|.:..|                                         :|.:.
  Rat    56 -------QASNPYLPTRGG-----------------------------------------TTVAS 72

  Fly   410 GTRFTGSFASEVSTRCIRCHTCNYPTDLSLGGVRQLPQNYLLVRRIEVLRLQA--GEDVISRVWC 472
            |.||             ||.:|.:...|...||..|.:|.|:...|::.:.::  .|..:.:..|
  Rat    73 GGRF-------------RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKLDQPMC 124

  Fly   473 SLCTEEISATYHCISCTLNLCTLCK--EAH------------ERQRSTAS----------HRMRS 513
            ....|| ....:|::|.:..|:|||  .||            :||:|..|          .|::.
  Rat   125 EEHEEE-RINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAVLVGSNDRVQG 188

  Fly   514 ILELRRARKQKQQQMGLGDSSKLVLRCGIHTNFELKAFCTNCRQLACTDCLVILHKGHRHETISR 578
            ::.            .|.|:.|.:..|              ||:              :.:.:..
  Rat   189 VIS------------QLEDTCKTIEEC--------------CRK--------------QKQDLCE 213

  Fly   579 AIGHQGKLLKE-ATDQTRPLCQYAEHSIERLNAIARGINDRCDDIQTQVERYMQQYMD-----AL 637
            ...|...:|:| .|:.|:.:.:..|..:|.:..:.|..:|..:::...||..: |:||     ..
  Rat   214 KFDHLYSILEERKTEMTQAITRTQEEKLEHVRTLIRKYSDHLENVSKLVESGI-QFMDEPEMAVF 277

  Fly   638 TVHRKTLLQQISRARESKVEVVLKQQLDLEKRTQQAMDAVRFSQELCEIGADVEILSYVTILLRR 702
            ..:.|||||:|:.|.::                        |..|..|.|  .||::..|:.|.|
  Rat   278 LQNAKTLLQKITEASKA------------------------FQMEKIEQG--YEIMNNFTVNLNR 316

  Fly   703 LE 704
            .|
  Rat   317 EE 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8419NP_609193.1 RING_Ubox 304..>345 CDD:473075 15/45 (33%)
Bbox1_TRIM45_C-X 470..514 CDD:380867 16/67 (24%)
Bbox2 539..576 CDD:380814 3/36 (8%)
CC_brat-like 583..703 CDD:475168 28/125 (22%)
Filamin 748..846 CDD:395505
Trim55NP_001012218.1 RING-HC_MuRF2 21..84 CDD:438417 24/131 (18%)
Bbox2_MuRF2_C-II 122..166 CDD:380890 11/44 (25%)
EzrA <158..>323 CDD:428797 42/228 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 324..378
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 406..528
Blue background indicates that the domain is not in the aligned region.

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