DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8419 and Trim32

DIOPT Version :10

Sequence 1:NP_609193.1 Gene:CG8419 / 34118 FlyBaseID:FBgn0031999 Length:921 Species:Drosophila melanogaster
Sequence 2:NP_001012103.1 Gene:Trim32 / 313264 RGDID:1305238 Length:655 Species:Rattus norvegicus


Alignment Length:666 Identity:122/666 - (18%)
Similarity:210/666 - (31%) Gaps:231/666 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 LKCGICLDVYTD----PRTLHCLHSFCLQCLVSENFKDESLWDQDQARSEEPSNYSLRSEMGGSS 366
            |:|.||::.:|:    |:.|||.|:.|.|||       |.|               |.|.:.|  
  Rat    19 LECPICMESFTEEQLRPKLLHCGHTICRQCL-------EKL---------------LASSING-- 59

  Fly   367 AELTATVSPARQRGSSFTLRRKKSMDRLVIRSKSDGKRSTSSIGTRFTGSFASEVSTRCIRCHTC 431
                                                                       :||..|
  Rat    60 -----------------------------------------------------------VRCPFC 65

  Fly   432 NYPTDLSLGGVRQLPQNYLLVRRIEVLRLQAGEDVISRVWCSLCTEEISATYHCISCTLNLCTLC 496
            :..|.::  .:.||..|..:::.|:...|   .:.:..:.|..|...:...: |.||.|.||..|
  Rat    66 SKITRIT--SLTQLTDNLTVLKIIDTAGL---SEAVGLLMCRACGRRLPRQF-CRSCGLVLCEPC 124

  Fly   497 KEAHERQ--------RSTASHRMRSILE-LRRAR----KQKQQQMGLGDSSKLVLRCGIHTNFEL 548
            :||..:.        :..|..|.|...| |.|.|    :.::::..|...|:           :|
  Rat   125 READHQPPGHCTLPVKEAAEERRRDFGEKLTRLRELTGELQRRKAALEGVSR-----------DL 178

  Fly   549 KAFCTNCRQLACTDCLVILHKGHRHETISRAIGHQGKLLKEATDQTRPL------------CQYA 601
            :|                     |::.:.:..||:.:.::|...::|..            .|..
  Rat   179 QA---------------------RYKAVLQEYGHEERRVQEELARSRKFFTGSLAEVEKSNSQVV 222

  Fly   602 EHSIERLNAIARGINDRCDDIQTQVER----YMQQYMD------ALTVHRKTLLQQISRARESKV 656
            |.....||........|||....::::    .:::..|      ..::.|:..||.:...:...|
  Rat   223 EEQSYLLNIAEVQAVSRCDYFLAKIKQADVALLEETADEEEPELTASLPRELTLQDVELLKVGHV 287

  Fly   657 EVVLKQQLDLEKRTQQAMD--AVRFSQELCEIGADVEILSYVTILLRRLEYCQQFKPPVDPKISD 719
            ..:...|...:.||....|  ||       |.||.....:.||  .|.::...:...| .|:.|.
  Rat   288 GPLQIGQAVKKPRTVNMEDSWAV-------EEGAASSASASVT--FREMDMSPEEVVP-SPRASP 342

  Fly   720 SLH-------------FLPKIRAP-STKDQRDIPLYGIITMQVVEPSLCTLEWEGFSQLRLHKKA 770
            :..             ||.|:.|. ||....::|    :::.|...|...:...|..::::..:.
  Rat   343 AKQRSSEAASSIQQCLFLKKMGAKGSTPGMFNLP----VSLYVTSQSEVLVADRGNYRIQVFNRK 403

  Fly   771 DLLLHSR--------------DADGVSLCHGGLEINC--MLKYKDSSSKFLPVEVSDNR------ 813
            ..|...|              .||..:|....:.:||  ::...||....|.|...|..      
  Rat   404 GFLKEIRRSPSGIDSFVLSFLGADLPNLTPLSVAMNCHGLIGVTDSYDNSLKVYTLDGHCVACHR 468

  Fly   814 ---DGTYNISFTPDAQGTLILTITINDRPIKGGP---FTFQARQVRPHTGIYHCCSFCSGKGNRN 872
               ...:.|:..|..|      ..:.|  ::||.   ||     |....|:......||....:.
  Rat   469 SQLSKPWGITALPSGQ------FVVTD--VEGGKLWCFT-----VDRGAGVVKYSCLCSAVRPKF 520

  Fly   873 VMCSCEGHMPGYSGCG 888
            |.|..||.:....|.|
  Rat   521 VTCDAEGTVYFTQGLG 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8419NP_609193.1 RING_Ubox 304..>345 CDD:473075 16/42 (38%)
Bbox1_TRIM45_C-X 470..514 CDD:380867 14/51 (27%)
Bbox2 539..576 CDD:380814 3/36 (8%)
CC_brat-like 583..703 CDD:475168 26/143 (18%)
Filamin 748..846 CDD:395505 21/125 (17%)
Trim32NP_001012103.1 RING-HC_TRIM32_C-VII 19..68 CDD:438249 22/131 (17%)
Bbox1_TRIM32_C-VII 99..139 CDD:380864 11/40 (28%)
NHL_TRIM32_like 364..646 CDD:271331 37/190 (19%)
NHL repeat 376..416 CDD:271331 6/43 (14%)
NHL repeat 433..472 CDD:271331 7/38 (18%)
NHL repeat 474..514 CDD:271331 10/52 (19%)
NHL repeat 515..566 CDD:271331 6/22 (27%)
NHL repeat 579..611 CDD:271331
NHL repeat 619..645 CDD:271331
Blue background indicates that the domain is not in the aligned region.

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