DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8419 and Trim36

DIOPT Version :10

Sequence 1:NP_609193.1 Gene:CG8419 / 34118 FlyBaseID:FBgn0031999 Length:921 Species:Drosophila melanogaster
Sequence 2:NP_849203.2 Gene:Trim36 / 28105 MGIID:106264 Length:729 Species:Mus musculus


Alignment Length:708 Identity:140/708 - (19%)
Similarity:222/708 - (31%) Gaps:268/708 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   305 DLKCGICLDVYTDPRTLHCLHSFCLQCLVSENFKDESLWDQDQARSEEPSNYSLRSEMGGSSAEL 369
            :|.|..|.:::|.|..|.|.||.|.:|:      .|.|...|.:.::..|:.|     ..||..|
Mouse    30 ELICPACKELFTHPLILPCQHSVCHKCV------KELLLSLDDSFNDVASDSS-----NQSSPRL 83

  Fly   370 TATVSPARQRGSSFTLRRKKSMDRLVIRSKSDGKRSTSSIGTRFTGSFASEVSTRCIRCHTCNYP 434
            ..| ||              |||::...::...||  :|:..|.|          ...|..|.:.
Mouse    84 RLT-SP--------------SMDKIDKINRPGWKR--NSLTPRPT----------TFPCPGCEHD 121

  Fly   435 TDLSLGGVRQLPQNYLLVRRIEVLRLQAGEDVISRVWCSLC---TEEISATYHCISCTLNLCTLC 496
            .||...||..|.:|:.|...:|  |.:......:.:.|.||   .:|  :|..|:.|:.:.|..|
Mouse   122 VDLGERGVSGLFRNFTLETIVE--RYRQAARAATAIMCDLCKPPPQE--STKSCMDCSASYCNEC 182

  Fly   497 ----------KEAHERQRSTASHRMRSILELRRARKQKQQQMGLGDSSKLVLRCGIHTNFELKAF 551
                      |..||....|.:.|.:                        ||.|..|....:..:
Mouse   183 FKIYHPWGTVKAQHEYVGPTTNFRPK------------------------VLMCPEHETERINMY 223

  Fly   552 CTNCRQLACTDC-LVILHKGHRHETISRA---------------IGHQGKLLKEATDQTRPLCQY 600
            |..||:..|..| |...|..||..|:|.|               ||.:.: :|....:...|.:.
Mouse   224 CELCRRPVCHLCKLGGNHSNHRVTTMSSAYKTLKEKLSKDIDFLIGKESQ-VKSQISELNLLMKE 287

  Fly   601 AEHSIER-----------------------LNAIARGINDRCDDIQTQVERYMQQYMDALTVHRK 642
            .|.:.||                       |.||......|.|...||:|.|..      .:...
Mouse   288 TECNGERAKEEALAHFEKLFEILEDRKSSVLKAIDASKKLRLDKFHTQMEEYQG------LLENN 346

  Fly   643 TLL---QQISRARESKVEVVLKQQLDLEKRTQQAMDAVR---------FSQELCEIGADVEILSY 695
            .|:   |::.:..:....|...:||.|  |.|:|.::::         |...:..|....|:|..
Mouse   347 GLVGYAQEVLKETDQSCFVQTAKQLHL--RIQKATESLKSFRPAAQASFEDYVVNISKQTEVLGE 409

  Fly   696 VTILLRRLEYCQQFKPPVDPKISDSLHFLPKIRAPSTKDQRDIPLYGIITMQVVEPSLCTLEWEG 760
            ::.          |...:|         :|:|....:|              |...:|  ::|. 
Mouse   410 LSF----------FSSGID---------IPEINEEQSK--------------VYNNAL--IDWH- 438

  Fly   761 FSQLRLHKKADLLLHSRDADGVSLCHGGLEINCMLKYKDSSSKFLPVEVSDNRDGTYNISFTP-D 824
                  |.:.|      .||           :.:|:|:           ..|||... ||:.. :
Mouse   439 ------HPEKD------KAD-----------SYVLEYR-----------KINRDEEM-ISWNEIE 468

  Fly   825 AQGTLILTITINDRPIKGGPFTFQARQVRPHTGIYHCCSFCS----------------------- 866
            ..||..:...:.    ...|:.|:.|..|.     ..||.||                       
Mouse   469 VHGTSKVVSNLE----SNSPYAFRVRAYRG-----SICSPCSRELILHTPPAPVFSFLFDEKCGY 524

  Fly   867 ---------------GKGNRNVMCSCE----GHMPGYSGCGH--GHAG-HPGRRHWSC 902
                           .:...||:.:.|    ||   |:...:  |..| ..|:..|:|
Mouse   525 NTEHLLLNLKRDRVESRAGFNVLLAAERIQVGH---YTSLDYIIGDVGVTKGKHFWAC 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8419NP_609193.1 RING_Ubox 304..>345 CDD:473075 13/39 (33%)
Bbox1_TRIM45_C-X 470..514 CDD:380867 14/56 (25%)
Bbox2 539..576 CDD:380814 11/37 (30%)
CC_brat-like 583..703 CDD:475168 27/154 (18%)
Filamin 748..846 CDD:395505 17/98 (17%)
Trim36NP_849203.2 RING-HC_TRIM36_C-I 28..125 CDD:438414 33/132 (25%)
Bbox1_TRIM36_C-I 151..205 CDD:380906 13/55 (24%)
Bbox2_TRIM36_C-I 210..254 CDD:380836 15/43 (35%)
CC_brat-like 256..380 CDD:475168 25/132 (19%)
COS 359..407 CDD:465805 10/49 (20%)
FN3 431..494 CDD:214495 18/104 (17%)
SPRY_PRY_TRIM36 516..719 CDD:293951 11/67 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 606..626
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.