DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8419 and madd-2

DIOPT Version :9

Sequence 1:NP_609193.1 Gene:CG8419 / 34118 FlyBaseID:FBgn0031999 Length:921 Species:Drosophila melanogaster
Sequence 2:NP_503395.1 Gene:madd-2 / 178619 WormBaseID:WBGene00016539 Length:765 Species:Caenorhabditis elegans


Alignment Length:527 Identity:113/527 - (21%)
Similarity:215/527 - (40%) Gaps:111/527 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   304 DDLKCGICLDVYTDPRTLHCLHSFCLQCLVSENFKDESLWDQDQARSEEPSNYSLRSEMGGSSAE 368
            ::|||.||:..:.||..|.|.||.|..|.:..:....|. ......|..||...:.|::..|::.
 Worm     3 EELKCTICIRFFEDPIILTCGHSLCRMCALKAHQPSTSS-GSSSTSSPRPSTPGILSQILSSASS 66

  Fly   369 LTATVSPARQRGSSFTL------RRKKSMDRLVIRSKSDG--------KRSTSSIG---TRFTGS 416
            ..:..|.....|:|.|:      ......|:|.:.|::|.        .|.:|.||   :|....
 Worm    67 PISPQSAGSSSGASDTMSLCVSDNGDHESDKLSVVSETDSGVVGCGRTSRPSSIIGPPLSRLHNI 131

  Fly   417 FASEVSTRCIRCHTC-------------NYPTDLSLGGVRQLPQNYLLVRRIEVL---------- 458
            .....|...:.|::|             :.||:|::   :.:.:.|||....:..          
 Worm   132 LTPSTSGVQLVCNSCQKPSYFCDENSIVSAPTNLAM---QNVIRRYLLAHPDKAFLTPSCSGSSG 193

  Fly   459 ---RLQAGEDVISRVWCSLC--TEEISATYHCISCTLNLCTLCKEA-HERQRSTASHRMRSILEL 517
               ..|:.::..|:  |.||  :|...|...|..|.:..||.|:.| |..:...|.|   ::|:.
 Worm   194 SSGSSQSSDEASSQ--CQLCEGSENRMANVFCEQCDIYYCTPCQTALHPARGPLAKH---NLLQA 253

  Fly   518 RRARKQKQQQMGLGDSSKLVLRCGIHTNFELKAFCTNCRQLACTDCLVIL-HKGHRHETISRAI- 580
            ....::|...:....:.:.:|||..|....|..:|..|:...|:.||..| |..|..:::..|. 
 Worm   254 NDGERKKSSAITTATTVRDLLRCATHPGEGLTMYCLACKVPVCSRCLQDLRHANHDVQSLPIACK 318

  Fly   581 GHQGKL---LKEATDQTRPLCQYAEHSIERLNAIARGINDRCDDIQTQVERYMQQYMDALTVHRK 642
            ||:.:|   |::.:::.:.    |...|.||..:...:.:.|:|.::.:...:.|.::.|.:.::
 Worm   319 GHKTELSTTLQQLSEKAKT----ATEEIGRLKGLHDVVKNNCNDFKSSLCIQIDQLIEQLQMRKE 379

  Fly   643 TLLQQISRARESKVEVVLKQQLDLEKRTQQAMDAVRFSQELCEIGADVEILSYVTILLRRLEYC- 706
            .|:|.:....::| ..:||.|:            |:.:.:|.:..|             .:::| 
 Worm   380 KLMQHVDEQADNK-RRILKSQI------------VKCTGKLTKTSA-------------LIQFCI 418

  Fly   707 QQFKPPVDPKI-----------SDSLHFL--PKIRAPSTKDQRDIPLYGIITMQVVEPSLCTLEW 758
            :..|.| ||.:           |.||.||  .::|   ||.:.|......:..:.::.::.||: 
 Worm   419 EALKEP-DPTVYMQISNALLHRSTSLEFLWHKEMR---TKPETDSEFVLNLDTKHLQYTIQTLD- 478

  Fly   759 EGFSQLR 765
              |:||:
 Worm   479 --FAQLK 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8419NP_609193.1 RING 308..>334 CDD:214546 11/25 (44%)
zf-B_box 537..576 CDD:279037 13/39 (33%)
iSH2_PI3K_IA_R 583..703 CDD:304922 19/122 (16%)
Filamin 748..846 CDD:279024 5/18 (28%)
IG_FLMN 751..849 CDD:214720 5/15 (33%)
madd-2NP_503395.1 RING 7..>33 CDD:214546 11/25 (44%)
zf-B_box 271..313 CDD:279037 13/41 (32%)
BBC 320..445 CDD:128778 28/155 (18%)
FN3 499..590 CDD:238020
SPRY_PRY_TRIM67_9 587..763 CDD:293947
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.