DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8419 and nhl-1

DIOPT Version :9

Sequence 1:NP_609193.1 Gene:CG8419 / 34118 FlyBaseID:FBgn0031999 Length:921 Species:Drosophila melanogaster
Sequence 2:NP_499028.1 Gene:nhl-1 / 176295 WormBaseID:WBGene00003597 Length:974 Species:Caenorhabditis elegans


Alignment Length:561 Identity:101/561 - (18%)
Similarity:173/561 - (30%) Gaps:208/561 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 LSLTPRPEVFDAPSPLTRSPSRSPGISPPVSPSPSITLRPSTPPENTVIFTDDLKCGICLDVYTD 317
            :|.:|:.|. :|...:....||.|      |..|:..:.|....|..      |.|.||||.|..
 Worm     1 MSSSPQNEA-EAREKMRELMSRPP------SSRPADFVNPLEKIEQL------LTCPICLDRYKQ 52

  Fly   318 PRTLHCLHSFCLQCLVSENFKDESLWDQDQARSEEPSNYSLRSEMGGSSAELTATVSPARQRGSS 382
            |:.|.|.|:||..||       ||..|                                      
 Worm    53 PKLLPCQHTFCYPCL-------ESCAD-------------------------------------- 72

  Fly   383 FTLRRKKSMDRLVIRSKSDGKRSTSSIGTRFTGSFASEVSTRCIRCHTCNYPTDLSLGGVRQLPQ 447
             ||.|.                                     ::|..|....::...||:....
 Worm    73 -TLHRN-------------------------------------LKCPECRAEHNIPYDGVKAFQP 99

  Fly   448 NYLLVRRIEVLRLQAGEDVISRVWCSLCTEEISATYHCISCTLNLCTLCKEAHERQRSTASHRMR 512
            ||.|...:|: .|||..:..:.:      ||....|:     |..|.:|.|..:.:.        
 Worm   100 NYTLTGFLEI-HLQATPESAAEI------EEYIHRYN-----LERCKICDEKADCEP-------- 144

  Fly   513 SILELRRARKQKQQQMGLGDSSKLVLRCGIHTNFELKAFCTNCRQLACTDCLVILHKGHRHETIS 577
                                                   |.:|.:.||.:|         .:|  
 Worm   145 ---------------------------------------CAHCDRKACKEC---------RQT-- 159

  Fly   578 RAIGHQGKLLKEATDQTRPLCQYAEHSIERLNAIARGIN---DRCDDIQTQVERYMQQYMDALTV 639
                |...|.::.:.....:.:.|....|..:.:::|::   ..|:..:.:::.|..:|...|..
 Worm   160 ----HMDMLKRDMSRLLNQVKRLANRITEASDNLSKGVDMMTMNCETTKAEIKEYFHRYQRDLKK 220

  Fly   640 HRKTLLQQIS--RARESKVEVVLKQQLDLEKRTQ----QAMDAVRFSQELCEIGADVEILSYVTI 698
            .....|.::.  :|.|::....|:..|::|....    ..:||....:  |.| .|.|::.....
 Worm   221 KEDNFLMEVDTFQATETRNMSNLRDVLEIESSNMSEAVSRLDAAIKGE--CSI-EDSELVRMKNT 282

  Fly   699 LLRRLEYCQQFKPPVDPKISDSLHF--------LPKIRAPSTKDQ----------RDIPLYGIIT 745
            ....|||.:.|:|..|...:..|.|        ||  .|.:|..:          |.:||.   .
 Worm   283 FTEGLEYLRNFQPDADELFNRKLRFSAGDDAAKLP--AAITTSGELCVLVPQFSGRYLPLE---Q 342

  Fly   746 MQVVEPSLCTLEWEGFSQLRLHKKADLLLHSRDADGVSLCH 786
            ..:..|....||.:.: :::..::|.  :..|:||..|..|
 Worm   343 SYLPRPFRLPLESDSY-RVKSDERAS--MRDREADRTSSRH 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8419NP_609193.1 RING 308..>334 CDD:214546 14/25 (56%)
zf-B_box 537..576 CDD:279037 5/38 (13%)
iSH2_PI3K_IA_R 583..703 CDD:304922 20/128 (16%)
Filamin 748..846 CDD:279024 9/39 (23%)
IG_FLMN 751..849 CDD:214720 9/36 (25%)
nhl-1NP_499028.1 zf-C3HC4 43..83 CDD:278524 21/122 (17%)
FRQ <426..545 CDD:286504
NHL_TRIM71_like 691..974 CDD:271324
NHL repeat 715..754 CDD:271324
YncE 721..>973 CDD:225926
NHL repeat 762..800 CDD:271324
NHL repeat 808..844 CDD:271324
NHL repeat 852..893 CDD:271324
NHL repeat 902..932 CDD:271324
NHL repeat 948..974 CDD:271324
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489543at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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