DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8419 and F43G6.8

DIOPT Version :9

Sequence 1:NP_609193.1 Gene:CG8419 / 34118 FlyBaseID:FBgn0031999 Length:921 Species:Drosophila melanogaster
Sequence 2:NP_496523.1 Gene:F43G6.8 / 174815 WormBaseID:WBGene00009660 Length:263 Species:Caenorhabditis elegans


Alignment Length:208 Identity:45/208 - (21%)
Similarity:74/208 - (35%) Gaps:53/208 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   501 ERQRSTASHRMRSILELRRARKQ---KQQQMGLGDSSKLVLRCGIHT----------NFELKAFC 552
            |.|:|.....::..||..|.|:.   |.:|:.             ||          ..|.....
 Worm    29 EEQQSQEIRNLKRKLEEARQREDKYIKNEQLH-------------HTAMRSKQQRIERMEKSMES 80

  Fly   553 TNCRQLACTDCLVILHKGHRHETISRAIGHQGKLLKEATDQTRPLCQYAEHSIERLN-------A 610
            || |::..|.|.:     :..|.|...:..:.|::.:..|.........|...:.|.       |
 Worm    81 TN-RKMYATQCRL-----NDMENIYDDLEMESKIMADFIDHYYDSRNITEEDRDELQDKLDEEAA 139

  Fly   611 IARGINDRCDDIQTQVERYMQQYMDALTVHRKTLLQQISRARESKVEVVLKQQLDLEKRTQQAMD 675
            ..|.:.||..::     |:..:||..:...||    :.:..|:..:|  |.:||..|   ||.:.
 Worm   140 NYRDLEDRIKEV-----RHRDRYMKTVETERK----RTTFYRKKMLE--LAEQLQFE---QQEVT 190

  Fly   676 AVRFSQELCEIGA 688
            ......:||||.|
 Worm   191 GETPLWKLCEICA 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8419NP_609193.1 RING 308..>334 CDD:214546
zf-B_box 537..576 CDD:279037 9/48 (19%)
iSH2_PI3K_IA_R 583..703 CDD:304922 26/113 (23%)
Filamin 748..846 CDD:279024
IG_FLMN 751..849 CDD:214720
F43G6.8NP_496523.1 SMC_prok_B <15..>188 CDD:274008 39/191 (20%)
RING-HC_TRIM32_C-VII 198..243 CDD:319501 5/6 (83%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489543at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.