DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8419 and lin-41

DIOPT Version :9

Sequence 1:NP_609193.1 Gene:CG8419 / 34118 FlyBaseID:FBgn0031999 Length:921 Species:Drosophila melanogaster
Sequence 2:NP_001020998.1 Gene:lin-41 / 172760 WormBaseID:WBGene00003026 Length:1147 Species:Caenorhabditis elegans


Alignment Length:1010 Identity:191/1010 - (18%)
Similarity:318/1010 - (31%) Gaps:380/1010 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 QGAGSSGTGLSNVELGVQDRDSGSEPTSSLAGGGSSTSPESLLDNILSGASSVSVQSSSSSQASN 204
            :|| .||......|:.|...|||:|    |:.||||:..:|:                |..:..:
 Worm    13 EGA-PSGPRRLQTEIDVDANDSGNE----LSMGGSSSEGDSM----------------SHHRGEH 56

  Fly   205 ATVAQPIKAKEQLHPKRLLSLKASPELRVSPPTPDTTQPQVQMPTQLLLSLTPRPEVFDAPSPLT 269
            :    |....:..|            |...||.|..|                 ..:||.|..:.
 Worm    57 S----PNHHHQDNH------------LGSGPPPPQFT-----------------GSLFDTPPSMI 88

  Fly   270 RSPSRSP--------GISPPVSPSPSITLRPSTPPENTVIFTDDLKCGICLDVYTDPRTLH---- 322
            :||.:.|        |:..|                     .|..:|.:|    :...|:.    
 Worm    89 QSPQQQPQFQFNTGFGLGLP---------------------QDSFRCSVC----SKSSTIGVLPF 128

  Fly   323 -CLHSFCLQCLVSENFKDESLWDQDQARSEEPSNYSLRS-EMGGSSAELTATVS---------PA 376
             |.|..|..|.                 ...||:|..|: ::.|:.:..||..:         |:
 Worm   129 VCAHKTCQSCY-----------------QMTPSSYDRRACKLCGAVSTATANFTSQMYLSPTLPS 176

  Fly   377 RQRGS--------------------------SFTLRRKKSMDRLVIRSKSDGKRSTSSIG----- 410
            ..||:                          ||:|.........|:     |.|..||.|     
 Worm   177 PPRGALMSDCSTPTMNNHINSSTPLHQPRAFSFSLSGMPGSPSPVM-----GARMPSSAGGLMMR 236

  Fly   411 -TRFTGSFASEVSTRCIRCHTCNYPTDL------SLGGVRQLPQNYLLVRRI------------- 455
             ..|..|.:|..|...::     .|:.|      |:||.:|  |:.:|::.:             
 Worm   237 PIGFPDSDSSLTSWSPLQ-----QPSQLSINNLSSIGGHQQ--QSPMLMQNVFDSLAVNDDTPVF 294

  Fly   456 -------------------------------------EVLRLQAGEDVISR-------------- 469
                                                 ...|||....:.|:              
 Worm   295 SPLSPTNTSMHMPPSLMASPDVPKHSATIAPPRNSMCSTPRLQLATPMSSQSQQTFPIPSPLGSQ 359

  Fly   470 ---------VWCSLCTEEISATYHCISCTLNLCTLCKEAHERQRSTASH------RMRSILELRR 519
                     :.|..|..:||..| |:.|...||..|.:||:|.|:|..|      ::.:.|..|.
 Worm   360 PQQQQPMGPIQCQGCESKISFAY-CMQCQEALCIHCVQAHQRVRATKQHAFVELQQLMATLMSRA 423

  Fly   520 ARKQKQQQ----------------------------------MGLGDSS-KLVLRCGIHTNFELK 549
            .:.|:.||                                  :|.|:|| :....||.|.:. :.
 Worm   424 VQPQQAQQYTQNVGGSVRQALGSVGSGDVFFSGHVSGVENDSIGSGESSPRSSSVCGTHDSV-II 487

  Fly   550 AFCTNCRQ--LACTDCLVILHKG-HRHE---TISRAIGHQGKLLKEATDQTRPLCQYAEHSIERL 608
            ..|.||..  |.|..| |..|.| ||.:   .|..|:|       |..::::.|....|.:.:.:
 Worm   488 GICENCPHSVLLCAIC-VAQHPGKHRVQPLGDIRVAVG-------EVVNESQLLQWQCEKTGDTI 544

  Fly   609 NAIARGINDRCDDIQTQVERYMQQYMDALTVHRKTLLQQISRARESKVEVVLKQQLDLEKRTQQA 673
            ..|..||.......:.::......:::||...||.||:::...:..|:.|::.|...|:.:....
 Worm   545 KQIIDGIVTNATTAENEIRAAFDTHVNALEERRKELLKRVETVKNLKLSVLISQAESLQSKQIDL 609

  Fly   674 MDAVRFSQELCEIG-ADVEILSYVTILLRRLEYCQQFKPPVDPKISDSLHFLPKIRAPSTKDQR- 736
            ..|::.:.:|.:.. .|..:|..|   ..:|..||......:|. ::.|:.| .:.....:|.| 
 Worm   610 QQAIQTATKLMDSSDCDEMVLRQV---FEKLASCQMGNEGTEPN-NNILNVL-MLACQVNEDDRL 669

  Fly   737 --DIPLYGIITMQV-----VEPSLC----TLEWEGFSQLRLHKKADLLLHSRDADGVSLC----- 785
              ..|..||:..:.     :|...|    ::..:.|.:....::..:.:..|||.|..|.     
 Worm   670 KFTAPQDGILLNKARQFGNIESGPCAKNSSIVGDSFKKAIRERQTVIYVQLRDACGDLLSSSIAA 734

  Fly   786 --------------HGGLE-------INCMLKYKDSSSKFLPVEVSDNRDGTYNISFTPDAQGTL 829
                          |..||       :...:...|.|:  :.|.::...:|...:|:.|..:|:.
 Worm   735 TQPTSQALLPHQEPHSHLEQAMPTSDVQAFVISPDGST--VEVTMTPRENGIVALSYYPSIEGSY 797

  Fly   830 ILTITINDRPIKGGPFTFQARQVRPHTGIYHCCSFCSGKGNRNVMCSCEGHMP----GYSGCGHG 890
            .|.|.:...||.|.|.|...|:.|.:..|       :.||            |    |..|.|.|
 Worm   798 TLNILVKGTPISGCPTTMDIRRGRNYDEI-------AAKG------------PILTFGKEGSGDG 843

  Fly   891 HAGHPGRRHWSCC----GNVL----ENSECNVANK 917
            ....|    |..|    |.|:    .|:...:.:|
 Worm   844 ELCRP----WGICVDQRGRVIVADRSNNRVQIFDK 874

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8419NP_609193.1 RING 308..>334 CDD:214546 7/30 (23%)
zf-B_box 537..576 CDD:279037 14/44 (32%)
iSH2_PI3K_IA_R 583..703 CDD:304922 21/120 (18%)
Filamin 748..846 CDD:279024 24/132 (18%)
IG_FLMN 751..849 CDD:214720 24/127 (19%)
lin-41NP_001020998.1 BBOX 478..516 CDD:197662 14/39 (36%)
BBC 519..645 CDD:128778 27/135 (20%)
Filamin 693..812 CDD:279024 22/120 (18%)
NHL_TRIM71_like 823..1147 CDD:271324 15/75 (20%)
YncE 847..1144 CDD:225926 7/32 (22%)
NHL repeat 848..887 CDD:271324 7/31 (23%)
NHL repeat 895..934 CDD:271324
NHL repeat 942..978 CDD:271324
NHL repeat 987..1028 CDD:271324
NHL repeat 1037..1067 CDD:271324
NHL repeat 1121..1147 CDD:271324
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489543at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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