DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8419 and si:dkey-106l3.6

DIOPT Version :9

Sequence 1:NP_609193.1 Gene:CG8419 / 34118 FlyBaseID:FBgn0031999 Length:921 Species:Drosophila melanogaster
Sequence 2:XP_003199368.2 Gene:si:dkey-106l3.6 / 100526811 ZFINID:ZDB-GENE-091204-159 Length:261 Species:Danio rerio


Alignment Length:112 Identity:28/112 - (25%)
Similarity:34/112 - (30%) Gaps:47/112 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 PRPEVFDAPSPLTRSPS--------------------------------RSPGISPPVSPSPSIT 289
            |||.| ..|:|:.|..:                                ||...|...|.:.|..
Zfish    74 PRPLV-SPPAPVLRREASYLAQRKASTADICYHQFHYKMDDVIVNQYVLRSSSTSSSSSSTSSGP 137

  Fly   290 LRPSTPPENTVIFTDDLKCGICLDVYT----DPRTLHCLHSFCLQCL 332
            :.|..|          |.|..|...|.    .||.|.||||.|.:||
Zfish   138 VMPCEP----------LDCPTCGHTYNFAGKRPRILSCLHSVCEECL 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8419NP_609193.1 RING 308..>334 CDD:214546 13/29 (45%)
zf-B_box 537..576 CDD:279037
iSH2_PI3K_IA_R 583..703 CDD:304922
Filamin 748..846 CDD:279024
IG_FLMN 751..849 CDD:214720
si:dkey-106l3.6XP_003199368.2 RING-HC_RNF208 143..196 CDD:319473 15/42 (36%)
RING-HC finger (C3HC4-type) 146..192 CDD:319473 13/29 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489543at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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