DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8419 and rnf207

DIOPT Version :9

Sequence 1:NP_609193.1 Gene:CG8419 / 34118 FlyBaseID:FBgn0031999 Length:921 Species:Drosophila melanogaster
Sequence 2:XP_002937592.3 Gene:rnf207 / 100487154 XenbaseID:XB-GENE-6043644 Length:639 Species:Xenopus tropicalis


Alignment Length:588 Identity:109/588 - (18%)
Similarity:176/588 - (29%) Gaps:202/588 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 LKCGICLDVYTDPRTLHCLHSFCLQCLVSENFKDESLWDQDQARSEEPSNYSLRSEMGGSSAELT 370
            |.|.:|.:.|..|..|.|.|:||..||                                      
 Frog    23 LACFLCHEQYEHPCLLDCYHNFCASCL-------------------------------------- 49

  Fly   371 ATVSPARQRGSSFTLRRKKSMDRLVIRSKSDGKRSTSSIGTRFTGSFASEVSTRCIRCHTCNYPT 435
                    ||                          .:|..|.|             |..|.:.:
 Frog    50 --------RG--------------------------RAIDNRLT-------------CPLCGHQS 67

  Fly   436 DLSLGGVRQLPQNYLLVRRIEVLRLQAGEDVISRVWCSLCTEEI-----SATYHCISCTLNLCTL 495
            .:.  |...||.    |.|:....:.:..|....|.|:.|..|.     ...|:|.:|...||..
 Frog    68 IVK--GNNGLPP----VDRLLQFLVDSSSDFDEVVQCANCDLECKKQDGEIMYYCNTCNQPLCVK 126

  Fly   496 CKEAHERQRSTASHRMRSILELRRARKQKQQQMGLGDSSKLVLRCGIHTNFELKAFCTNCRQLAC 560
            |::...:.:..:.|.:.|:     |::.|.          :..:|.:|....: .|.|..:.:.|
 Frog   127 CRDETHKAKMFSRHEIVSL-----AKRAKD----------IYKKCSLHEEPYI-MFSTEKKSMLC 175

  Fly   561 TDCLVILHKGHRHETISRAIGH-QG-KLLKEATDQTRPLCQYAEHSIERLNAIARGINDRCDDIQ 623
            .:|...:....|...|.....: || :.|.:|....:.|......:|..|.|:...:.:..|:.:
 Frog   176 INCFRDMQVESRAHCIDIETAYMQGCEKLDQAVMAVKELQTSTREAIVLLKAMIEEVRNSADEEE 240

  Fly   624 TQVERYMQQYMDALTVHRKTLLQQISRARESKVEVVLKQQ----------LDLEKRTQQAMDAVR 678
            |.:........:.|...||.||:.:....|.| |...|:|          |.:...|..|..:..
 Frog   241 TSINTLFSNMQEKLADRRKILLKAVQCQHEEK-EKTFKEQLSHLASLLPTLQVHLVTCSAFLSTA 304

  Fly   679 FSQELCEIGAD-VEILSYVTILLRRLEYCQQFKPPVDPKISDSLHFLPKIRAPSTKDQRDIPLYG 742
            ...|..::|.. :|.|..:..|..||...|..|...|                          :|
 Frog   305 NKAEFLDLGYQLMERLQKIVKLPHRLRPYQSSKINTD--------------------------FG 343

  Fly   743 IITMQVVEPSLCTLEWEGFSQLRLHKKADLLLHSRDADGVS-LCHG-GLEINCMLKYKDSSSKFL 805
            ....:.:||.                   |:|:.|....|| .|.| ||....|:....||...:
 Frog   344 AEFARCLEPL-------------------LMLNLRRGGSVSGSCGGPGLSNGSMISSGQSSKTLI 389

  Fly   806 PVEVSDNRDGTYNISFTPDAQGTLILTITINDRPI---------KGGPFTFQARQVRPHTGIYHC 861
            ....|.:.|   .:|.|    |:::...|:: |.|         :..|||            .||
 Frog   390 MPGCSSSVD---KMSIT----GSIVRKPTMH-RYISTKVLLAEGEENPFT------------KHC 434

  Fly   862 CSF 864
            .|:
 Frog   435 RSY 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8419NP_609193.1 RING 308..>334 CDD:214546 11/25 (44%)
zf-B_box 537..576 CDD:279037 7/38 (18%)
iSH2_PI3K_IA_R 583..703 CDD:304922 28/131 (21%)
Filamin 748..846 CDD:279024 23/108 (21%)
IG_FLMN 751..849 CDD:214720 24/108 (22%)
rnf207XP_002937592.3 RING-HC_RNF207 22..64 CDD:319472 18/125 (14%)
Bbox1_RNF207-like 97..150 CDD:380872 12/57 (21%)
BBC 202..322 CDD:128778 25/120 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489543at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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