DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8419 and trim71

DIOPT Version :9

Sequence 1:NP_609193.1 Gene:CG8419 / 34118 FlyBaseID:FBgn0031999 Length:921 Species:Drosophila melanogaster
Sequence 2:XP_004915429.1 Gene:trim71 / 100486898 XenbaseID:XB-GENE-6035039 Length:853 Species:Xenopus tropicalis


Alignment Length:707 Identity:152/707 - (21%)
Similarity:249/707 - (35%) Gaps:192/707 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 VFDAPSPLTRSPSRSPGISPPVSPSPSI---TLRPSTPPENTVIFTDDLKCGICLDVYTDPRTLH 322
            |..||...:.|.|.|..:|...|.:.|.   |...|.|                      ||.||
 Frog    20 VSSAPISSSSSSSSSSQVSTSSSSAGSAGGGTGLASAP----------------------PRRLH 62

  Fly   323 ---CLHSFCLQCLVSENFKDESLWDQDQARSEEPSNYSLRSEMGGSSAELTATVSPARQRGSSFT 384
               |||:||.|||.......:||    |.|.....:..|.||.|..:..            ||..
 Frog    63 VLPCLHAFCRQCLEGRRSPGDSL----QLRCPVCDHKVLISEAGMDALP------------SSTF 111

  Fly   385 LRRKKSMDRLV----IRSKSDGKRSTSSIGTRFTGSFASEVSTRCIRCHTCNYPTDLSLGGVRQL 445
            |.....:|.:|    .:.:|:|.|:.|:          .:.|..|           .|.|.:|:.
 Frog   112 LHLSNLLDAVVGAADEQQQSNGGRTASN----------RQRSASC-----------SSSGLLRRA 155

  Fly   446 PQNYLLVRRIEVLRLQAGEDVISRVWCSLCTEEISATYHCISCTLNLCTLCKEAHERQRSTASHR 510
            |.:.                  |...||.|.:...|:.||:.|..|||..|..||:|.|.|..|.
 Frog   156 PPSQ------------------SEPRCSSCDDGNGASSHCLDCQENLCDNCLRAHQRVRLTKDHF 202

  Fly   511 MR-------------------------SILELRRARKQKQQQMGLGDSS--KLVLRCGIHT---- 544
            :.                         |:|.:...|...||.    |..  |..:|..::|    
 Frog   203 IERFPASPCSSAASSAATTSSSSSSAFSLLPVYPERLYCQQH----DEEIYKFGIRKRVYTLADL 263

  Fly   545 ----NFELKAFCTNCRQLACTDCLVILHKGHRHETISRAIGHQGKLLKEATDQTRPLC------- 598
                ::.|..:|.:|....|.:|           |:.|..||....|:||...:|.|.       
 Frog   264 VRIKDWVLHFYCDSCSVPICREC-----------TMGRHAGHSFVYLQEALQDSRALTIQLLADA 317

  Fly   599 ----QYAEHSIERLNAIARGINDRCDDIQTQVERYMQQYMDALTVHRKTLLQQISRARESKVEVV 659
                |..:.|:|:..|:|..:..:...:|::::....::..||......||.::.:.|:.|.:.:
 Frog   318 QQGRQAIQLSLEQAQALAEQVEMKAKVVQSEIKAVTSRHKKALEERECELLWKVEKIRQVKAKSL 382

  Fly   660 LKQQLDLEKRTQQAMDAVRFSQELCEIGADVEILSYVTILLRRLEYCQQFKPPVDPKISDSLHFL 724
            ..|...|.:...:....:...|::.|.|..::||.....:|.:::..:..:..:..:..|.:.|.
 Frog   383 YHQVEKLHQALNKLDSTINAVQQVLEEGCTMDILIARDRVLAQVQDVKNARGLLQLQEDDRIMFT 447

  Fly   725 PKIRAPSTKDQRDIPLY------GIITMQVVEPSLCTLEWEGFSQLRLHKKADLLLHSRDADGVS 783
            |.          |..||      |:::.... .:|.....||..:....|.|...:...|.||.:
 Frog   448 PP----------DQALYLAIKSLGLVSSGAF-AALTKATGEGLKRALQGKVASFTVIGYDHDGEA 501

  Fly   784 LCHGGLEINCMLKYKDSSSKFLPVEVSDNRDGTYNISFTPDAQGTLILTITINDRPIKGGPFTFQ 848
            ...||..|..::...|.:  ....||||..:|||.:|:.|..:|..::::.:.::.|:..||...
 Frog   502 RLSGGDLITVLVMGPDGN--LFAAEVSDQLNGTYLVSYRPQLEGEHLISVMVCNQHIENSPFKVN 564

  Fly   849 ARQVRPHTGIYHCCSFCSGKGNRNVMCSCEGHMPGYSGCGHGHAGHPGR--RHWSCC 903
            .:..|.:.||                     .:|..|..|.|  .|.|:  |.|..|
 Frog   565 VKSGRCYLGI---------------------GLPTLSFGGEG--DHDGKLCRPWGVC 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8419NP_609193.1 RING 308..>334 CDD:214546 12/28 (43%)
zf-B_box 537..576 CDD:279037 7/46 (15%)
iSH2_PI3K_IA_R 583..703 CDD:304922 25/130 (19%)
Filamin 748..846 CDD:279024 24/97 (25%)
IG_FLMN 751..849 CDD:214720 25/97 (26%)
trim71XP_004915429.1 RING-HC_TRIM71_C-VII 8..95 CDD:319503 28/100 (28%)
RING-HC finger (C3HC4-type) 12..92 CDD:319503 28/97 (29%)
Bbox1_TRIM71_C-VII 163..206 CDD:380870 17/42 (40%)
Bbox2_TRIM71_C-VII 240..307 CDD:380854 18/81 (22%)
BBC 299..432 CDD:128778 25/132 (19%)
Filamin 467..560 CDD:366210 23/95 (24%)
NHL_TRIM71_like 569..853 CDD:271324 12/53 (23%)
NHL repeat 594..633 CDD:271324 2/5 (40%)
NHL repeat 641..680 CDD:271324
NHL repeat 688..724 CDD:271324
WD40 repeat 689..725 CDD:293791
NHL repeat 732..772 CDD:271324
NHL repeat 781..811 CDD:271324
WD40 repeat 785..822 CDD:293791
NHL repeat 827..853 CDD:271324
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489543at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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