DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8419 and LOC100150342

DIOPT Version :10

Sequence 1:NP_609193.1 Gene:CG8419 / 34118 FlyBaseID:FBgn0031999 Length:921 Species:Drosophila melanogaster
Sequence 2:XP_068071744.1 Gene:LOC100150342 / 100150342 -ID:- Length:794 Species:Danio rerio


Alignment Length:683 Identity:120/683 - (17%)
Similarity:205/683 - (30%) Gaps:264/683 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   304 DDLKCGICLDVYTDPRTLHCLHSFCLQCLVSENFKDESLWDQDQARSEEPSNYSLRSEMGGSSAE 368
            |...|.:|||:..||.|:.|.||:|:.|:       ...|::||                     
Zfish     9 DQYSCSVCLDLLRDPVTIPCGHSYCMSCI-------NECWNKDQ--------------------- 45

  Fly   369 LTATVSPARQRGSSFTLRRKKSMDRLVIRSKSDGKRSTSSIGTRFTGSFASEVSTRCIRC-HTCN 432
                                                               :...:|.:| ||.:
Zfish    46 ---------------------------------------------------KAPYKCPQCRHTFS 59

  Fly   433 YPTDLSLGGVRQLPQNYLLVRRIEVLRLQ------AGEDVISRVWCSLCT-EEISATYHCISCTL 490
            ....|:        ::.:|...:|.||.|      ||...|:   |..|. |.|.|...|:.|..
Zfish    60 SKPPLN--------RSTVLAELMEKLRAQESPQSPAGPGEIA---CDFCVGESIKAVKSCMECRA 113

  Fly   491 NLCTLCKEAHERQRSTASHRMRSILELRRARKQKQQQMGLGDSSKLVLRCGIHTNFELKAFCTNC 555
            :.|.|..:.|....:...|.:                    ..:..:..|..|... |:.:|...
Zfish   114 SYCELHVQPHYNVPALRKHVL--------------------VKASTIPVCSKHDKL-LEVYCRTD 157

  Fly   556 RQLACTDCLVILHKGHRHETISRAIGHQGKLLKEATDQTR--------------PLCQYAEHSIE 606
            :...|..||:..|||  |:|:......:.|.||.:..||:              .....:.||..
Zfish   158 QTCVCAHCLMDDHKG--HDTVPSTTERKEKELKLSDTQTKVKKTIQAKEKELQNMKMDISSHSDS 220

  Fly   607 RLNAIARGINDRCDDIQTQVERYMQQYMDALTVHRKTLLQQISRARE---------SKVEVVLKQ 662
            .|.|| :.......::...:|:...:.::.:....|..|.:..:.:|         .|.|.||:.
Zfish   221 ALKAI-KNSKKAFAELVKLIEKKSSEVIEKIKAQEKADLDEGEKIQEKLKGEIADLKKREGVLED 284

  Fly   663 QLDLEKRTQ-----QAMDAVRFSQELCEIG-----ADVEILSYVTILLRRLE-YCQQ-------- 708
            .|..:...|     :::.....|.:.|.:.     :..|:...|..|.::|| .|.|        
Zfish   285 LLQTDNNIQFLQNYESVSPSSGSNDFCNLSFQPCCSFEEVSQLVCELTKKLEKTCMQEINQTINK 349

  Fly   709 ------FKPPVDPKISDSLHFLPKIRAPSTKDQRDIPLYGIITMQVVEPSLCTLEWEGFSQLRLH 767
                  ..|..|.|:.|::...|.:..|:.|       :|.:|                     |
Zfish   350 VSDLSIKTPSFDIKVGDNVRVKPSVLTPTHK-------WGSVT---------------------H 386

  Fly   768 KKADLLLHSRDADGVSLCHGGLEINCMLKYKDSSSKFLPVEVSDNRDGT------YNIS------ 820
            |...::                        |....:||.|:..:.::.|      .|::      
Zfish   387 KSIGVV------------------------KKIQGEFLTVDFPEQKNWTGVVLEMENVTSAGSDL 427

  Fly   821 FTPDAQGTLILTITINDRPIKGGPFTFQARQVRPHTGIYHCCSFCSGKGN--RNVMCSCEGHMPG 883
            .||:|.    :.|.:.||.           :|:|        |..:.:.|  |||.....|.:..
Zfish   428 ATPNAS----VNIKVGDRV-----------KVKP--------SVTTPEHNWGRNVTHKSVGVVKA 469

  Fly   884 YSGCGHGHAGHPGRRHWSCCGNVLENSECNVAN 916
            ...........||..:|.   .:|  ||..:||
Zfish   470 IKDDDSLLVDFPGHANWK---GIL--SEMELAN 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8419NP_609193.1 RING_Ubox 304..>345 CDD:473075 14/40 (35%)
Bbox1_TRIM45_C-X 470..514 CDD:380867 11/44 (25%)
Bbox2 539..576 CDD:380814 11/36 (31%)
CC_brat-like 583..703 CDD:475168 25/152 (16%)
Filamin 748..846 CDD:395505 14/109 (13%)
LOC100150342XP_068071744.1 RING_Ubox 9..76 CDD:473075 22/153 (14%)
Bbox1_TRIM8-like 94..135 CDD:380860 11/60 (18%)
Bbox2_TRIM16-like 142..186 CDD:380827 12/46 (26%)
OmpH 181..>280 CDD:214922 15/99 (15%)
SH3_15 436..493 CDD:465720 16/80 (20%)
SH3_15 514..569 CDD:465720
SH3_15 581..638 CDD:465720
SH3_15 728..784 CDD:465720
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.