DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLC5A11 and ChT

DIOPT Version :9

Sequence 1:NP_609192.1 Gene:SLC5A11 / 34117 FlyBaseID:FBgn0031998 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster


Alignment Length:578 Identity:124/578 - (21%)
Similarity:222/578 - (38%) Gaps:139/578 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GSVDYAVFLGMIVLSTSTGIYFGCIKKSKVKLEEAEPTLPTTTPKRRKHDFGSEKMSEYLLGSRN 79
            |.|...:|..:|::   .||:.|                       ||...|::...|.:|..|:
  Fly     6 GVVSIVLFYLLILV---VGIWAG-----------------------RKKQSGNDSEEEVMLAGRS 44

  Fly    80 LKVFPVAMSLIASYISGVTILGTTSEIYNYGTQYWFIAIAIMLQGIAVSYVYIPVFSALQVGSSY 144
            :.:|....::.|:::.|..|.||...||..|. .|..|..    |.|:|.|:..:|.|       
  Fly    45 IGLFVGIFTMTATWVGGGYINGTAEAIYTSGL-VWCQAPF----GYALSLVFGGIFFA------- 97

  Fly   145 EYLEMRFHSVVRSI----ASFMFILDEILFLPFI---VYVPAIALNQVSGINLHVI------AVV 196
              ..||....:..:    .||...:..:||||.:   |:..|..|..: |..|.||      ..|
  Fly    98 --NPMRKQGYITMLDPLQDSFGERMGGLLFLPALCGEVFWAAGILAAL-GATLSVIIDMDHRTSV 159

  Fly   197 IVVVC--VFYTFVGGIKAVVHTDAWQVLVMFLSVLAVAILA--TVYANGLNVLFDDAAKGGRLIF 257
            |:..|  :|||..||:.:|.:||..|:..:|:.:......|  ..:...|:.|..|       ..
  Fly   160 ILSSCIAIFYTLFGGLYSVAYTDVIQLFCIFIGLWMCIPFAWSNEHVGSLSDLEVD-------WI 217

  Fly   258 NNTNPSPYVRHTVWSVLI--GGFSYWTSFNAVNQTMVQRYMSLPSLKKARASMAIFTIGVAAFVS 320
            .:..|..:..:..:.:|:  ||..:        |...||.:|..:..:|:....:...|......
  Fly   218 GHVEPKKHWLYIDYGLLLVFGGIPW--------QVYFQRVLSSKTAGRAQLLSYVAAAGCILMAI 274

  Fly   321 VCCYVGLLIYEM------YKDCDPLSAGLITHDDQLLPL---FVVQSVGHIYGMSGLFIAGIFGA 376
            ....:|.:....      ||...||:   :.....:||:   ::.......:|: |...|.:..:
  Fly   275 PPVLIGAIAKATPWNETDYKGPYPLT---VDETSMILPMVLQYLTPDFVSFFGL-GAVSAAVMSS 335

  Fly   377 ALSSLSVVLNSTSLVILEDIVRGCFKMQPSERASTILVKSTVIVLGFVALSLVFVLEQLSGILSI 441
            |.||   ||::.|: ...::.:..|:.:.||.....:::..:||:|.:|..:...:..:.|:.|:
  Fly   336 ADSS---VLSAASM-FARNVYKLIFRQKASEMEIIWVMRVAIIVVGILATIMALTIPSIYGLWSM 396

  Fly   442 CTSMTAIAAGTTFGLF-TLGMLVPW---ANTVGTAVGGIASALLAGWISFGTQFTIAAGELNSQK 502
            |:.:..:.      || .|.|:|.:   .||.|:....|.:  ||..:|.|              
  Fly   397 CSDLVYVI------LFPQLLMVVHFKKHCNTYGSLSAYIVA--LAIRLSGG-------------- 439

  Fly   503 LPVSVEGCVGNVTLRENIWVDE---EQVFPLYRLSYHWINPIGVATVIVVGALVSLVT 557
                 |..:|...|.:....||   ||:||.             .|:.::.:||:|::
  Fly   440 -----EAILGLAPLIKYPGYDEETKEQMFPF-------------RTMAMLLSLVTLIS 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC5A11NP_609192.1 SLC5sbd_NIS-SMVT 17..556 CDD:271383 122/573 (21%)
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 123/577 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448261
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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