DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLC5A11 and RGD1563815

DIOPT Version :9

Sequence 1:NP_609192.1 Gene:SLC5A11 / 34117 FlyBaseID:FBgn0031998 Length:600 Species:Drosophila melanogaster
Sequence 2:XP_006256382.1 Gene:RGD1563815 / 365549 RGDID:1563815 Length:695 Species:Rattus norvegicus


Alignment Length:593 Identity:117/593 - (19%)
Similarity:224/593 - (37%) Gaps:145/593 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 HDFGSEKMSEYLLGSRNLKVFPVAMSLIAS-----YISGVTILGTTSEIYNYGTQYWFIAIAIML 122
            |..|:.|  ::.|..:||..:.:.:|:.:|     :..|:..:|..|.| ..|...|.....:.:
  Rat    48 HSRGTIK--DFFLAGQNLAWWLMGLSIYSSTVGSGHFMGLAGIGAASGI-AVGAFEWNTVFMLFM 109

  Fly   123 QGIAVSYVYIPVFSALQVGSSYEYLEMRFHSV-VRSIASFMFILDEILF-LPFIVYVPAIALNQV 185
            .|    ::::|::|...|.:..|||:.||.|| ::...||:|::..||. :...:...|:.|..|
  Rat   110 LG----WIFVPIYSKAGVVTLPEYLKKRFGSVRIQLFFSFVFLIVYILSRISMEIGFGAMFLKMV 170

  Fly   186 SGINLHVIAVVIVVVCVFYTFVGGIKAVVHTDAWQVLVMFLSVLAVAILATVYANGLNVLFDDAA 250
            ..|:::...:.::.:...||..||:..|.:.:..|..:|.|....:...|.....|...|.:..:
  Rat   171 WDIDIYQTMLTVLTITGVYTITGGLATVAYVETLQAGIMVLGSALLMGYAFYEVGGYQELVNKYS 235

  Fly   251 KGGRLIFNNTN----PSPYV---------RHTV-----W-SVLIGGFSYWTSFNAVNQTMVQRYM 296
            |.........|    |..|.         |..|     | .:::|..:....:...:|..|||::
  Rat   236 KAIPSTIQQGNWTAKPECYTPREDAFHVFRSCVSGDVPWPGLVLGATTVSLFYGCADQVSVQRFL 300

  Fly   297 SLPSLKKARASM-------------AIFTIGVAAFVS-------VCCYVGLLIYEMYKDCDPL-- 339
            :    .|:|..|             .:|.:.:...:|       |.|.|.       .:|:..  
  Rat   301 A----GKSRLHMEGGCLLCGYLKLLPMFLMVMPGMISRVLFPDQVACVVP-------SECEKFCG 354

  Fly   340 -SAGLITHDDQLLPLFVVQSVGHIYGMSGLFIAGIFGAALSSLSVVLNSTSLVILEDIVRGCFKM 403
             ..|.......:|.|.|:.|     |:.|..::.:..:.:|||:.:.||:|.:...:|...   :
  Rat   355 RGTGCSALAYPVLVLGVMPS-----GLQGFMLSTVCASLMSSLTSIFNSSSALFTLNIYTW---I 411

  Fly   404 QPSERASTILVKSTVIVLGFVALSLVFV----------LEQLSGILSIC--TSMTAIAAGTTF-- 454
            :|:.....:::.....|:..:|:::|::          |.:...||..|  .|:||:.....|  
  Rat   412 RPTATEKELMIAGRFFVIILLAVTIVWIPIIEMAPSETLFEYMQILKSCLTPSVTAVFLLAVFCK 476

  Fly   455 -----GLFTLGMLVPWANTVGTAVGGIASALLAGWISFGTQFTIAAGELNSQKLPVSVEGCVGNV 514
                 |.|       |...:|:.:|  ...|||.:. :|..   ..||  .::.|:.:.|     
  Rat   477 RVNEQGAF-------WGLILGSTIG--VFRLLAEFF-YGPP---TCGE--DRQCPIFICG----- 521

  Fly   515 TLRENIWVDEEQVFPLYRLSYHWINPIGVATVIVVGALVSLVTKPTNMKTLDPDLISPVIHRFLP 579
                              |.|.:.....:...|::...:||.|:|         :....:|..  
  Rat   522 ------------------LHYLYFGFCLLLVSILIILAISLATEP---------IADDHLHGL-- 557

  Fly   580 KECFSGRN 587
              |:|.||
  Rat   558 --CWSLRN 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC5A11NP_609192.1 SLC5sbd_NIS-SMVT 17..556 CDD:271383 109/560 (19%)
RGD1563815XP_006256382.1 SLC5-6-like_sbd 26..695 CDD:294310 117/593 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340222
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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