DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLC5A11 and Slc5a4b

DIOPT Version :9

Sequence 1:NP_609192.1 Gene:SLC5A11 / 34117 FlyBaseID:FBgn0031998 Length:600 Species:Drosophila melanogaster
Sequence 2:XP_008771154.1 Gene:Slc5a4b / 294342 RGDID:1309867 Length:660 Species:Rattus norvegicus


Alignment Length:559 Identity:113/559 - (20%)
Similarity:217/559 - (38%) Gaps:101/559 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 YLLGSRNLKVFPVAMSLIASYISGVTILGTTSEIYNYGTQYWFIAIA-----IMLQGIAVSYVYI 132
            :.|..|::..:|:..||.||.|.....:|........|     ||||     .:|..:.:.:|::
  Rat    58 FFLAGRDVSWWPMGASLFASNIGSNHFVGLAGTGAASG-----IAIAAVEWNALLMVLVLGWVFV 117

  Fly   133 PVFSALQVGSSYEYLEMRFHSVVRSIASFMFILDEILFLPF----IVYVPAIALNQVSGINLHVI 193
            |::....|.:..|||..||..  :.:..::.:|...:.:..    .::..||.:....|:||::.
  Rat   118 PIYIKAGVTTMPEYLRKRFGG--KRLQIYLSVLSLFIMVAIQTSSTIFSGAIFIQLALGLNLYLA 180

  Fly   194 AVVIVVVCVFYTFVGGIKAVVHTDAWQVLVMFLSVLAVAILATVYANG--------LNVLFDDAA 250
            ..:::.:..|||..||:.:|::||:.|..:|.:..|.:...|.....|        :|.: ....
  Rat   181 VFILLAITAFYTVAGGLASVIYTDSVQTFIMLVGSLILMGFAFAEVGGYESFTEKYMNAI-PSVV 244

  Fly   251 KGGRLIFNNT--NPSPYVRHTV---------WSVLIGGFS-----YWTSFNAVNQTMVQRYMSLP 299
            :|..|..:..  .|.|...|..         |..||.|.:     ||    ..:|.||||.:...
  Rat   245 EGDNLTISPKCYTPQPDSFHIFRDPINGDIPWPGLIFGMTILAIWYW----CADQVMVQRCLCGK 305

  Fly   300 SLKKARAS---------MAIFTIGVAAFVSVCCYVGLLIYEMYKDCDPLSAGLITHDDQLLPLFV 355
            ::...:|:         :.:|.:.:...:|...|...:...:..:|.......:...:...|..|
  Rat   306 NMSHVKAACIMCGYLKLLPMFLMVMPGMISRILYTDKVACVVPSECVKQCGTAVGCTNYAYPTLV 370

  Fly   356 VQSVGHIYGMSGLFIAGIFGAALSSLSVVLNSTSLVILEDIVRGCFKMQPSERASTILVKSTVIV 420
            ::.:..  |:.||.::.:..:.:|||:.:.||.|.:...|:... .:.:.|||  .::|...|..
  Rat   371 LELMPD--GLRGLMLSVMLASLMSSLTSIFNSASTLFTMDLYTK-IRKKASER--ELMVAGRVFG 430

  Fly   421 LGFVALSLVFV----LEQLSGILSICTSMTAIAAGTTFGLFTLGMLVPWANTVGTAVGGIASALL 481
            :..:.:|:::|    ..|...:....:|.::........:|.|.:.....|..| |..|:...|:
  Rat   431 IVLIVISILWVPLIQASQNGQLFHYISSFSSYIGPPVGAVFLLAIFCKRVNEQG-AFWGLMVGLV 494

  Fly   482 AGWISFGTQFTIAAGE-LNSQKLPVSVEGCVGNVTLRENIWVDEEQVFPLYRLSYHWINPIGVAT 545
            .|.|...|:|....|. |.....|..:.|                     ....|..|....|:.
  Rat   495 IGLIRMITEFIYGTGSCLEPSNCPRIICG---------------------VHYMYFAIILFFVSI 538

  Fly   546 VIVVGALVSLVTKPTNMKTLDPDLISPVIHRFLPKECFS 584
            ::::|  ||.:|:|.           |.:|  |.:.|:|
  Rat   539 LVILG--VSFLTEPI-----------PDVH--LYRLCWS 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC5A11NP_609192.1 SLC5sbd_NIS-SMVT 17..556 CDD:271383 106/529 (20%)
Slc5a4bXP_008771154.1 SLC5-6-like_sbd 27..660 CDD:294310 113/559 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340247
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.750

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