DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLC5A11 and Slc5a4

DIOPT Version :9

Sequence 1:NP_609192.1 Gene:SLC5A11 / 34117 FlyBaseID:FBgn0031998 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_001099853.1 Gene:Slc5a4 / 294341 RGDID:1306923 Length:671 Species:Rattus norvegicus


Alignment Length:572 Identity:121/572 - (21%)
Similarity:229/572 - (40%) Gaps:121/572 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 YLLGSRNLKVFPVAMSLIASYI-SG--VTILGTTSEIYNYGTQYWFIAIAIMLQGIAVSYVYIPV 134
            :.|..|::..:|:..||.||.| ||  |.:.||.:......|.:...:.|::|   .:.:.::|:
  Rat    69 FFLAGRSMTWWPMGASLFASNIGSGHFVGLAGTGAATGIAVTAFESHSFALLL---VLGWFFVPI 130

  Fly   135 FSALQVGSSYEYLEMRFH----SVVRSIASFMFILDEILFLPFIVYVPAIALNQVSGINLHVIAV 195
            :....|.:..|||..||.    .:..|:.|....:  ||.:...::..||.:....|::|::...
  Rat   131 YIKAGVMTMPEYLRKRFGGKRLQIYLSVLSLFICV--ILTISADIFSGAIFIKLALGLDLYLAIF 193

  Fly   196 VIVVVCVFYTFVGGIKAVVHTDAWQVLVMFLSVLAVAILATVYANG--------LNVLFDDAAKG 252
            :::.:...:|..||:.:|::||..|.::|.:....:.|.|.|...|        :|.: ....:|
  Rat   194 ILLAITAVFTITGGLASVIYTDTLQAIIMLVGSFILMIYAFVEVGGYESFTEKYMNAI-PSVVEG 257

  Fly   253 GRLIFNNT--NPSPYVRH--------------TVWSVLIGGFSYWTSFNAVNQTMVQRYMSLPSL 301
            ..|..:..  .|.|...|              |.:.:.|....||    .:||.:|||.:...::
  Rat   258 DNLTISPKCYTPQPDSFHIFRDAVTGDIPWPGTAFGMPITALWYW----CINQVIVQRCLCGKNM 318

  Fly   302 KKARAS---------MAIFTIGVAAFVSVCCYVGLLI----YEMYKDCDPLSAGLITHDDQLLPL 353
            ...:|:         :.||.:.:...:|...|..::.    .|..|.|. :..|...:   ..|:
  Rat   319 SHVKAACIVCGYLKLLPIFFMVMPGMISRILYTDMVACVVPSECVKQCG-VDVGCTNY---AYPM 379

  Fly   354 FVVQSVGHIYGMSGLFIAGIFGAALSSLSVVLNSTSLVILEDIVRGCFKMQPSERA--------S 410
            .|::.:.  .|:.||.::.:..:.:|||:.:.||.|.:...|:... .:.:.|||.        .
  Rat   380 LVLKLMP--MGLRGLMLSVMLASLMSSLTSIFNSASTLFTMDLYTK-IRKKASERELLIAGRLFV 441

  Fly   411 TILVKSTVIVLGFVALS----LVFVLEQLSGILSICTSMTAIAAGTTFGLFTLGMLVPWANTVGT 471
            ::|:.::::.:..|.:|    |:...|.:|..|.     ..|||     :|.:.:.....|..| 
  Rat   442 SVLIVTSILWVPIVEVSQGGQLIHYTEAISSYLG-----PPIAA-----VFLVAIFCKRVNEQG- 495

  Fly   472 AVGGIASALLAGWISFGTQFTIAAGE-LNSQKLPVSVEGCVGNVTLRENIWVDEEQVFPLYRLSY 535
            |..|:...|:.|.|....:|:...|. |.....|..:.|                     ....|
  Rat   496 AFWGLMVGLVLGLIRMIAEFSYGTGSCLAPSSCPKVICG---------------------VHYLY 539

  Fly   536 HWINPIGVATVIVVGALVSLVTKPTNMKTLDPDLISPVIHRFLPKECFSGRN 587
            :.|....|:.::::|  ||.:|||.           |.:|  |.:.|:|.||
  Rat   540 YAIILFFVSILVILG--VSYLTKPI-----------PDVH--LYRLCWSLRN 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC5A11NP_609192.1 SLC5sbd_NIS-SMVT 17..556 CDD:271383 111/539 (21%)
Slc5a4NP_001099853.1 SLC5-6-like_sbd 38..671 CDD:294310 121/572 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340246
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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