DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8460 and Chid1

DIOPT Version :9

Sequence 1:NP_609190.2 Gene:CG8460 / 34115 FlyBaseID:FBgn0031996 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_001136153.2 Gene:Chid1 / 68038 MGIID:1915288 Length:393 Species:Mus musculus


Alignment Length:409 Identity:168/409 - (41%)
Similarity:246/409 - (60%) Gaps:35/409 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLRVALLLLLLTTVRGTLA-PDSHKSKS-----KTKESALRGGPQDQDVFDLGLVSPEPLAKDIV 66
            ||.|..|.|:..:|..||: .|:.|:.|     ||:.|       |:.|.|.|||..:..|:|:|
Mouse     4 LLHVLWLALVCGSVHTTLSKSDAKKAASKMLLEKTQFS-------DKPVQDRGLVVTDIKAEDVV 61

  Fly    67 SNHRGYFKETGL-RRFNGTTLGYVTPWNSHGYDVAKIFAKKFDIISPVWLQIVKQG-DRYAVAGT 129
            ..||.|...... |.|.|..||||||||||||||||:|..||..|||||||:.::| :.:.:.|.
Mouse    62 LEHRSYCSSRARERNFAGEVLGYVTPWNSHGYDVAKVFGSKFTQISPVWLQLKRRGREMFEITGL 126

  Fly   130 HDIDAGWLTDVRRKGKQVHNQRTVKVFPRFIFDHFTDRDIKLLLSDAQERTKVNDVLIKCCKDNG 194
            ||:|.||:..|::..|      .|::.||.:|:.:|..|.:.:|....|..:::..:.:..|:..
Mouse   127 HDVDQGWMRAVKKHAK------GVRIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVAQVAKNQH 185

  Fly   195 FDGLVLEVWSQLAGRIDDKILYTLVLQMAKELQKQQLRLILVIPPF----RKETGHLFGEKHMDK 255
            |||.|:||||||..:....:::.|. .:|:.|.:.:|.:||||||.    ..:.| :|..|..::
Mouse   186 FDGFVVEVWSQLLSQKHVGLIHMLT-HLAEALHQARLLVILVIPPAVTPGTDQLG-MFTHKEFEQ 248

  Fly   256 LFKHIYAFSLMTYDFSSVQRPGANAPLYFVRKAVETIAPEGCADMTAKRAKILLGLNMYGNDY-- 318
            |...:..|||||||:|:.|:||.||||.::|..|:.:.|:     :..|:|||||||.||.||  
Mouse   249 LAPILDGFSLMTYDYSTSQQPGPNAPLSWIRACVQVLDPK-----SQWRSKILLGLNFYGMDYAA 308

  Fly   319 TPDGGGPITFSQYLDLVRHVKKHLTYDERDVENFFEI-KNDDGRHIVFYPTLYSINERIKLAQEL 382
            :.|...|:..::|:..::..:..:.:|.:..|:|||. ||..|||:||||||.|:..|::||:||
Mouse   309 SKDAREPVIGARYVQTLKDHRPRVVWDSQAAEHFFEYKKNRGGRHVVFYPTLKSLQVRLELAREL 373

  Fly   383 GTGISIWELGQGLNYFYDL 401
            |.|:|||||||||:|||||
Mouse   374 GVGVSIWELGQGLDYFYDL 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8460NP_609190.2 GH18_SI-CLP 81..402 CDD:119355 141/329 (43%)
Glyco_18 86..393 CDD:214753 130/314 (41%)
Chid1NP_001136153.2 GH18_SI-CLP 77..393 CDD:119355 141/329 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835166
Domainoid 1 1.000 244 1.000 Domainoid score I2196
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12229
Inparanoid 1 1.050 285 1.000 Inparanoid score I2836
Isobase 1 0.950 - 0 Normalized mean entropy S4727
OMA 1 1.010 - - QHG54390
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003978
OrthoInspector 1 1.000 - - oto91992
orthoMCL 1 0.900 - - OOG6_105228
Panther 1 1.100 - - LDO PTHR46066
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3718
SonicParanoid 1 1.000 - - X2735
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.880

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