DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8460 and CHID1

DIOPT Version :10

Sequence 1:NP_609190.2 Gene:CG8460 / 34115 FlyBaseID:FBgn0031996 Length:402 Species:Drosophila melanogaster
Sequence 2:XP_011518601.1 Gene:CHID1 / 66005 HGNCID:28474 Length:478 Species:Homo sapiens


Alignment Length:406 Identity:163/406 - (40%)
Similarity:241/406 - (59%) Gaps:29/406 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLRVALLLLLLTTVRGTLA-PDSHKSKSKT--KESALRGGPQDQDVFDLGLVSPEPLAKDIVSNH 69
            |..:..|.|..:.|..||: .|:.|:.|||  ::|..    .|:.|.|.|||..:..|:.:|..|
Human    89 LFNLLWLALACSPVHTTLSKSDAKKAASKTLLEKSQF----SDKPVQDRGLVVTDLKAESVVLEH 149

  Fly    70 RGYFKETGL-RRFNGTTLGYVTPWNSHGYDVAKIFAKKFDIISPVWLQIVKQG-DRYAVAGTHDI 132
            |.|...... |.|.|..||||||||||||||.|:|..||..|||||||:.::| :.:.|.|.||:
Human   150 RSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREMFEVTGLHDV 214

  Fly   133 DAGWLTDVRRKGKQVHNQRTVKVFPRFIFDHFTDRDIKLLLSDAQERTKVNDVLIKCCKDNGFDG 197
            |.||:..||:..|.:|      :.||.:|:.:|..|.:.:|....|..:::..:::..|:..|||
Human   215 DQGWMRAVRKHAKGLH------IVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQVAKNQHFDG 273

  Fly   198 LVLEVWSQLAGRIDDKILYTLVLQMAKELQKQQLRLILVIPPF----RKETGHLFGEKHMDKLFK 258
            .|:|||:||..:....:::.|. .:|:.|.:.:|..:|||||.    ..:.| :|..|..::|..
Human   274 FVVEVWNQLLSQKRVGLIHMLT-HLAEALHQARLLALLVIPPAITPGTDQLG-MFTHKEFEQLAP 336

  Fly   259 HIYAFSLMTYDFSSVQRPGANAPLYFVRKAVETIAPEGCADMTAKRAKILLGLNMYGNDY--TPD 321
            .:..|||||||:|:..:||.||||.:||..|:.:.|:     :..|:|||||||.||.||  :.|
Human   337 VLDGFSLMTYDYSTAHQPGPNAPLSWVRACVQVLDPK-----SKWRSKILLGLNFYGMDYATSKD 396

  Fly   322 GGGPITFSQYLDLVRHVKKHLTYDERDVENFFEIKND-DGRHIVFYPTLYSINERIKLAQELGTG 385
            ...|:..::|:..::..:..:.:|.:..|:|||.|.. .|||:||||||.|:..|::||:|||.|
Human   397 AREPVVGARYIQTLKDHRPRMVWDSQASEHFFEYKKSRSGRHVVFYPTLKSLQVRLELARELGVG 461

  Fly   386 ISIWELGQGLNYFYDL 401
            :|||||||||:|||||
Human   462 VSIWELGQGLDYFYDL 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8460NP_609190.2 GH18_SI-CLP 81..402 CDD:119355 139/329 (42%)
CHID1XP_011518601.1 GH18_SI-CLP 162..478 CDD:119355 139/329 (42%)

Return to query results.
Submit another query.