DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8460 and chid1

DIOPT Version :9

Sequence 1:NP_609190.2 Gene:CG8460 / 34115 FlyBaseID:FBgn0031996 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_001008105.1 Gene:chid1 / 493467 XenbaseID:XB-GENE-5752789 Length:394 Species:Xenopus tropicalis


Alignment Length:410 Identity:180/410 - (43%)
Similarity:253/410 - (61%) Gaps:26/410 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRAPDALLLRVALLLLLLTTVRGTLA-PDSHKSKSKTKESALRGGPQDQDVFDLGLVSPEPLAKD 64
            ||....||..||....|   :..||: .||.|:.||..|:..|  ..|..|...||||.:..|||
 Frog     1 MRLLSTLLFLVAATCPL---IHATLSKTDSKKAASKAPETKTR--LSDTLVQTRGLVSTDVKAKD 60

  Fly    65 IVSNHRGY-FKETGLRRFNGTTLGYVTPWNSHGYDVAKIFAKKFDIISPVWLQIVKQG-DRYAVA 127
            ||..||.| .|:...|..:...||||||||.||||:||.||.||.:||||||||.::| :.|.:.
 Frog    61 IVLEHRSYCAKKLKERHVSADVLGYVTPWNGHGYDIAKTFAAKFTLISPVWLQIKRKGKEAYHIT 125

  Fly   128 GTHDIDAGWLTDVRRKGKQVHNQRTVKVFPRFIFDHFTDRDIKLLLSDAQERTKVNDVLIKCCKD 192
            |.||:|.||:.|:|:..|      :.::.||.:||.::.:|.:.:.|...|..::...:::..||
 Frog   126 GLHDVDQGWIKDIRKTSK------STQIVPRILFDGWSYQDFESVFSSEDEIEELAGAMVQTAKD 184

  Fly   193 NGFDGLVLEVWSQLAGRIDDKILYTLVLQMAKELQKQQLRLILVIPP-FRKETGHL--FGEKHMD 254
            ..|||.|:||||||.|:...:::: |:..:.:.|:..:||.|||||| ....|.||  ||.|..|
 Frog   185 ERFDGFVVEVWSQLGGQKRQELVH-LLTHIGEALRLAKLRFILVIPPALAPGTDHLGMFGRKEFD 248

  Fly   255 KLFKHIYAFSLMTYDFSSVQRPGANAPLYFVRKAVETIAPEGCADMTAKRAKILLGLNMYGNDYT 319
            :|...:.:|||||||:||.||||.|:|:.:|:..::.:.||     :..|.||||||:.||.||:
 Frog   249 QLAPVVDSFSLMTYDYSSPQRPGPNSPITWVQACIQLLDPE-----SKWRKKILLGLHFYGMDYS 308

  Fly   320 PDG--GGPITFSQYLDLVRHVKKHLTYDERDVENFFEI-KNDDGRHIVFYPTLYSINERIKLAQE 381
            ..|  |.||..::|:::::..|..|.:|::..|::.|. ||..|:|.||:|||.||..|:.||:|
 Frog   309 ALGASGEPILGNRYIEILKEHKPKLLWDQQIAEHYLEYKKNKGGKHAVFFPTLKSIQVRLDLAEE 373

  Fly   382 LGTGISIWELGQGLNYFYDL 401
            ||||||||||||||:|||||
 Frog   374 LGTGISIWELGQGLDYFYDL 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8460NP_609190.2 GH18_SI-CLP 81..402 CDD:119355 148/328 (45%)
Glyco_18 86..393 CDD:214753 139/313 (44%)
chid1NP_001008105.1 GH18_SI-CLP 79..394 CDD:119355 148/327 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 265 1.000 Domainoid score I1861
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12229
Inparanoid 1 1.050 305 1.000 Inparanoid score I2605
OMA 1 1.010 - - QHG54390
OrthoDB 1 1.010 - - D1067925at2759
OrthoFinder 1 1.000 - - FOG0003978
OrthoInspector 1 1.000 - - otm47509
Panther 1 1.100 - - LDO PTHR46066
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3718
SonicParanoid 1 1.000 - - X2735
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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