DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8460 and chid1

DIOPT Version :9

Sequence 1:NP_609190.2 Gene:CG8460 / 34115 FlyBaseID:FBgn0031996 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_956351.1 Gene:chid1 / 337225 ZFINID:ZDB-GENE-030131-9169 Length:391 Species:Danio rerio


Alignment Length:408 Identity:171/408 - (41%)
Similarity:239/408 - (58%) Gaps:25/408 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRAPDALLLRVALLLLLLTTVRGTLAPDSHKSKSKTKESALRGGPQDQDVFDLGLVSPEPLAKDI 65
            |||....|    |:.|||..||.||:....|..||.:|:  .....::...|.|||..:|..:||
Zfish     1 MRADWTFL----LVCLLLPVVRSTLSKTDAKKASKVQEA--ESSVAERPAQDRGLVVTDPQWRDI 59

  Fly    66 VSNHRGYFKE-TGLRRFNGTTLGYVTPWNSHGYDVAKIFAKKFDIISPVWLQIVKQG-DRYAVAG 128
            |...:.:..: ...|:|.|..|||:|||||||||:||:|..|...:||||||:.::| :.:.:.|
Zfish    60 VREEKRFCHQCINTRQFKGAVLGYITPWNSHGYDIAKLFGPKLTSVSPVWLQLRRRGPESFHITG 124

  Fly   129 THDIDAGWLTDVRRKGKQVHNQRTVKVFPRFIFDHFTDRDIKLLLSDAQERTKVNDVLIKCCKDN 193
            .||.|.||:..||:..|:      .|:.||.:||.::.:|...:|....|..::....::..|..
Zfish   125 LHDHDPGWVKAVRKANKK------NKILPRLLFDGWSYQDYVSVLDSEDEMEELGREALEVAKAE 183

  Fly   194 GFDGLVLEVWSQLAGRIDDKILYTLVLQMAKELQKQQLRLILVIPP-FRKETGH--LFGEKHMDK 255
            ||||..||:||||.|. ..|.|..||..:.:.|...:|..:||||| ....||.  :||....:|
Zfish   184 GFDGYTLELWSQLGGN-KRKELVHLVTHLCETLNAGKLTCVLVIPPSVAPGTGQPGMFGRDDFEK 247

  Fly   256 LFKHIYAFSLMTYDFSSVQRPGANAPLYFVRKAVETIAPEGCADMTAKRAKILLGLNMYGNDYTP 320
            |...:.||||||||:|...|||.:|||.:||:.|..:|||     ...|.|||||:||||.|::.
Zfish   248 LAPVVDAFSLMTYDYSGPGRPGPSAPLPWVRECVLQLAPE-----NQWRHKILLGVNMYGLDFSS 307

  Fly   321 DGGG-PITFSQYLDLVRHVKKHLTYDERDVENFFEIKNDDG-RHIVFYPTLYSINERIKLAQELG 383
            .||. |:..::.::|::.||..|.:||...|:||..|.::| :|:|:||||..:..||.||.|||
Zfish   308 HGGAEPLLGARCIELLKEVKPKLQWDENTGEHFFNYKRNNGVKHVVYYPTLKFLQLRISLAAELG 372

  Fly   384 TGISIWELGQGLNYFYDL 401
            ||||:|||||||:|||||
Zfish   373 TGISMWELGQGLDYFYDL 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8460NP_609190.2 GH18_SI-CLP 81..402 CDD:119355 146/327 (45%)
Glyco_18 86..393 CDD:214753 135/312 (43%)
chid1NP_956351.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 27..46 4/20 (20%)
GH18_SI-CLP 76..391 CDD:119355 146/327 (45%)
Glyco_18 80..382 CDD:214753 135/313 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578371
Domainoid 1 1.000 180 1.000 Domainoid score I3465
eggNOG 1 0.900 - - E1_KOG2091
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12229
Inparanoid 1 1.050 286 1.000 Inparanoid score I2827
OMA 1 1.010 - - QHG54390
OrthoDB 1 1.010 - - D1067925at2759
OrthoFinder 1 1.000 - - FOG0003978
OrthoInspector 1 1.000 - - oto38772
orthoMCL 1 0.900 - - OOG6_105228
Panther 1 1.100 - - LDO PTHR46066
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3718
SonicParanoid 1 1.000 - - X2735
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1615.840

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