DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8460 and Idgf4

DIOPT Version :10

Sequence 1:NP_609190.2 Gene:CG8460 / 34115 FlyBaseID:FBgn0031996 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_511101.2 Gene:Idgf4 / 31926 FlyBaseID:FBgn0026415 Length:442 Species:Drosophila melanogaster


Alignment Length:310 Identity:67/310 - (21%)
Similarity:104/310 - (33%) Gaps:100/310 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 GLVSPEPLAKDIVSNHR--------GYFKE-TGLRR---------FNGTTLGYVTPWNSHGYDVA 100
            |.....|.:..:|||:.        ..|:: |||:|         ..|.....|.|.|:....:.
  Fly    62 GYAGINPSSNKLVSNNEKLDLDLGSSLFRQVTGLKRKYPALKVLLSVGGDKDTVDPENNKYLTLL 126

  Fly   101 KIFAKKFDIISPVWLQIVKQGDRYAVAGTHDIDAGWLTDVRRKGKQVHNQ--RTVKVFPR-FIFD 162
            :....:...|:... .:||      ..|...:|.||... :.|.|:||..  :..|.|.: |..|
  Fly   127 ESSNARIPFINSAH-SLVK------TYGFDGLDLGWQFP-KNKPKKVHGSIGKFWKGFKKIFSGD 183

  Fly   163 HFTDRDIKLLLSDAQERTKVNDVLIKCCKDNGF--DGLVLEVWSQLAGRIDDKILYTLVLQMAKE 225
            |..|       ..|:|..:....|::..| |.|  ||.:|.                        
  Fly   184 HVVD-------EKAEEHKEAFTALVRELK-NAFRPDGYILG------------------------ 216

  Fly   226 LQKQQLRLILVIPPFRKETGHLFGEKHMDKLFKHIYAFSLMTYDFSSVQRPGAN-------APLY 283
                    :.|:|   .....||.:  :..:..::...:|.||||   |.|..|       ||:|
  Fly   217 --------LSVLP---NVNSSLFFD--VPAIINNLDYVNLHTYDF---QTPERNNEVADFPAPIY 265

  Fly   284 FVRKAVETIAPEGCADMTAK--------RAKILLGLNMYGNDY--TPDGG 323
            .:.:.    .||...:...|        .|||.:|:..||..:  |.|.|
  Fly   266 ELNER----NPEFNVNYQVKYWTGNRAPAAKINVGIATYGRAWKLTKDSG 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8460NP_609190.2 GH18_SI-CLP 81..402 CDD:119355 57/265 (22%)
Idgf4NP_511101.2 GH18_IDGF 26..442 CDD:119352 67/310 (22%)

Return to query results.
Submit another query.