DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8460 and Chid1

DIOPT Version :9

Sequence 1:NP_609190.2 Gene:CG8460 / 34115 FlyBaseID:FBgn0031996 Length:402 Species:Drosophila melanogaster
Sequence 2:XP_038963991.1 Gene:Chid1 / 293628 RGDID:1308955 Length:410 Species:Rattus norvegicus


Alignment Length:404 Identity:167/404 - (41%)
Similarity:246/404 - (60%) Gaps:25/404 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLRVALLLLLLTTVRGTLA-PDSHKSKSKTKESALRGGPQDQDVFDLGLVSPEPLAKDIVSNHRG 71
            ||.|..|.|:..:|..||: .|:.|:.|||.....:.  .|:.|.|.|||..:..|:|:|..||.
  Rat    21 LLHVLWLALVCGSVHTTLSKSDAKKAASKTLLEKTQF--SDKPVQDRGLVVTDIKAEDVVLEHRS 83

  Fly    72 YFKETGL-RRFNGTTLGYVTPWNSHGYDVAKIFAKKFDIISPVWLQIVKQG-DRYAVAGTHDIDA 134
            |...... |.|.|..||||||||||||||||:|..||..|||||||:.::| :.:.:.|.||:|.
  Rat    84 YCSARARERNFAGEVLGYVTPWNSHGYDVAKVFGSKFTQISPVWLQLKRRGREMFEITGLHDVDQ 148

  Fly   135 GWLTDVRRKGKQVHNQRTVKVFPRFIFDHFTDRDIKLLLSDAQERTKVNDVLIKCCKDNGFDGLV 199
            ||:..|::..|      .|::.||.:|:.:|..|.:.:|....|..:::..:::..|:..|||.|
  Rat   149 GWMRAVKKHAK------GVRIVPRLLFEDWTYDDFRSVLDSEDEIEELSKTVVQVAKNQHFDGFV 207

  Fly   200 LEVWSQLAGRIDDKILYTLVLQMAKELQKQQLRLILVIPPF----RKETGHLFGEKHMDKLFKHI 260
            :||||||..:....:::.|. .:|:.|.:.:|.:||||||.    ..:.| :|..|..::|...:
  Rat   208 VEVWSQLLSQKHVGLIHMLT-HLAEALHQARLLVILVIPPAVTPGTDQLG-MFTHKEFEQLAPIL 270

  Fly   261 YAFSLMTYDFSSVQRPGANAPLYFVRKAVETIAPEGCADMTAKRAKILLGLNMYGNDY--TPDGG 323
            ..|||||||:|:.|:||.||||.::|..|:.:.|:     :..|:|||||||.||.||  :.|..
  Rat   271 DGFSLMTYDYSTSQQPGPNAPLSWIRACVQVLDPK-----SQWRSKILLGLNFYGMDYAASKDAR 330

  Fly   324 GPITFSQYLDLVRHVKKHLTYDERDVENFFEI-KNDDGRHIVFYPTLYSINERIKLAQELGTGIS 387
            .|:..::|:..::..:..:.:|.:..|:|||. ||..|||:||||||.|:..|::||:|||.|:|
  Rat   331 EPVIGARYIQTLKDHRPRVVWDSQAAEHFFEYKKNRGGRHVVFYPTLKSLQVRLELARELGVGVS 395

  Fly   388 IWELGQGLNYFYDL 401
            ||||||||:|||||
  Rat   396 IWELGQGLDYFYDL 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8460NP_609190.2 GH18_SI-CLP 81..402 CDD:119355 141/329 (43%)
Glyco_18 86..393 CDD:214753 130/314 (41%)
Chid1XP_038963991.1 GH18_SI-CLP 94..410 CDD:119355 141/329 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338762
Domainoid 1 1.000 246 1.000 Domainoid score I2103
eggNOG 1 0.900 - - E1_KOG2091
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12229
Inparanoid 1 1.050 288 1.000 Inparanoid score I2733
OMA 1 1.010 - - QHG54390
OrthoDB 1 1.010 - - D1067925at2759
OrthoFinder 1 1.000 - - FOG0003978
OrthoInspector 1 1.000 - - oto95561
orthoMCL 1 0.900 - - OOG6_105228
Panther 1 1.100 - - LDO PTHR46066
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2735
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

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