DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8460 and Cht12

DIOPT Version :10

Sequence 1:NP_609190.2 Gene:CG8460 / 34115 FlyBaseID:FBgn0031996 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster


Alignment Length:230 Identity:53/230 - (23%)
Similarity:91/230 - (39%) Gaps:46/230 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 GFDGLVLEVW---SQLAGRIDDKILYTLVL-QMAKELQKQQLRLILVIPPFRKETGHLFGEKHMD 254
            ||||:.:: |   :.|.|..||:..:.::| ::....:|.|  |||::....:....:....::.
  Fly   137 GFDGVQID-WRYPTLLGGHPDDRQNFVILLEELGLIFRKNQ--LILMVAVLGRRDNRILESYNIP 198

  Fly   255 KLFKHIYAFSLMTYDFSSVQ--RPGANAPLY-FVRKAVETI--------APEGCADMTAKRAKIL 308
            ::..|.....||.:|.....  |...||||. :.....::|        |||          |::
  Fly   199 EIVNHSDFIHLMMHDEQDPYHLRLAYNAPLVGYEGSVTDSIMHWKRNGGAPE----------KLI 253

  Fly   309 LGLNMYGNDYTPDGGGPITFSQYLDLVRHVKK-----HLTYDERDVEN------FFEIKN----D 358
            ||:.::...:|.|.......|......|..|:     .:||:|..|:.      |.::..    .
  Fly   254 LGIPLFVRSFTMDRNQSTVGSACKGPGRQTKQSHRPGFMTYNEWCVQQSKWSRMFDQLAKVPYAT 318

  Fly   359 DGRHIVFYPTLYSINERIKLAQE--LGTGISIWEL 391
            .|...|.|....||..::.|.||  || |...|.:
  Fly   319 RGDQWVSYENPRSIWAKMHLLQEHKLG-GAMAWTI 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8460NP_609190.2 GH18_SI-CLP 81..402 CDD:119355 53/230 (23%)
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:471972 53/230 (23%)
ChtBD2 394..438 CDD:214696
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.