DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acbp1 and acbp-6

DIOPT Version :10

Sequence 1:NP_609187.1 Gene:Acbp1 / 34111 FlyBaseID:FBgn0031992 Length:90 Species:Drosophila melanogaster
Sequence 2:NP_496552.1 Gene:acbp-6 / 189453 WormBaseID:WBGene00012457 Length:115 Species:Caenorhabditis elegans


Alignment Length:98 Identity:34/98 - (34%)
Similarity:54/98 - (55%) Gaps:13/98 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSELQE------FNQAAEDVKNLNTTPGDNDLLELYSLYKQATVGDC-NTD----KPGFLDFKGK 54
            :|||::      |..|||:::.|.:.|.|.:.|:||:|||||..||. |.|    ..|  |..|:
 Worm     3 ISELEKKWTGLTFEIAAEEMRRLKSEPTDRERLKLYALYKQALHGDIPNEDVYPVPAG--DEVGR 65

  Fly    55 AKWEAWNNRKGMSNTDAQAAYITKVKALIAAVG 87
            .|:.||.::||.::...:|.|:...:.:|...|
 Worm    66 KKYAAWKSQKGANSEKCRADYVAIAEEMIKKYG 98

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acbp1NP_609187.1 ACBP 5..87 CDD:238248 30/92 (33%)
acbp-6NP_496552.1 ACBP 15..98 CDD:469667 30/84 (36%)

Return to query results.
Submit another query.