DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acbp1 and acbp-4

DIOPT Version :9

Sequence 1:NP_001285744.1 Gene:Acbp1 / 34111 FlyBaseID:FBgn0031992 Length:90 Species:Drosophila melanogaster
Sequence 2:NP_498609.1 Gene:acbp-4 / 186372 WormBaseID:WBGene00018949 Length:146 Species:Caenorhabditis elegans


Alignment Length:86 Identity:34/86 - (39%)
Similarity:47/86 - (54%) Gaps:9/86 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LQEFNQAAEDVKNLNTTPGD-------NDLLELYSLYKQATVGDCNTDKPGFLDFKGKAKWEAWN 61
            |.|..:||  |..:|..|.:       ||.|::||||||||.|.|:|.:|.|...:.:.||.|||
 Worm     5 LDEQFEAA--VWIINALPKNGPIKTSINDQLQMYSLYKQATSGKCDTIQPYFFQIEQRMKWNAWN 67

  Fly    62 NRKGMSNTDAQAAYITKVKAL 82
            ....|...:|:|.|:.|:..|
 Worm    68 QLGNMDEAEAKAQYVEKMLKL 88

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acbp1NP_001285744.1 ACBP 5..87 CDD:238248 33/85 (39%)
acbp-4NP_498609.1 ACBP 5..93 CDD:238248 34/86 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4281
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63566
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.780

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