DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rbsn-5 and PEP7

DIOPT Version :9

Sequence 1:NP_609186.1 Gene:Rbsn-5 / 34110 FlyBaseID:FBgn0261064 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_010610.3 Gene:PEP7 / 851923 SGDID:S000002731 Length:515 Species:Saccharomyces cerevisiae


Alignment Length:571 Identity:126/571 - (22%)
Similarity:208/571 - (36%) Gaps:166/571 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LEGFLCPICRADLKSIDVLTDHFARQHA--EEEDALKSFKDIFTKAKKKILNPFEDEKGASVSSP 82
            ||...||||.....::..|..|...:|.  :.||:|.|........|:|        |..||.|.
Yeast     3 LENVSCPICLRKFDNLQALNAHLDVEHGFNDNEDSLGSNDSRLVNGKQK--------KARSVDSS 59

  Fly    83 A--------------GSSSSAAGKNPNGNGDRNGPSNARS--------------RLNV-FNYMAR 118
            |              .|.....|:..|.|   .|..|.|.              :||: ..|..|
Yeast    60 AQKLKRSHWEKFKKGKSCCHTCGRTLNNN---IGAINCRKCGKLYCRRHLPNMIKLNLSAQYDPR 121

  Fly   119 QQPGAECSHF-------------------EYFQSIRNPRLE----RYASETNKLI------IRLH 154
            ......|.|.                   |:|: :||.:.|    |.....|:.:      |.|:
Yeast   122 NGKWYNCCHDCFVTKPGYNDYGEVIDLTPEFFK-VRNIKREDKNLRLLQLENRFVRLVDGLITLY 185

  Fly   155 R-----LLKDLPADSVQRRQHEQQTVAWLDGSSVKLCPSCAKSFHIARRQHHCRLCGGIMCND-- 212
            .     ::.:|..:| :..:.|:....|.|..||..|..|::.|.:..|:|||||||.::|:|  
Yeast   186 NTYSRSIIHNLKMNS-EMSKLERTVTPWRDDRSVLFCNICSEPFGLLLRKHHCRLCGMVVCDDAN 249

  Fly   213 --CSKFLPLEDAMQLASLSTTRSEPLQQLHQHEN------AIRLCEHCLWLL----DTRKDMHES 265
              ||..:.:...|..||     ..|.:...|.::      :||||.||:.:|    ...||:.  
Yeast   250 RNCSNEISIGYLMSAAS-----DLPFEYNIQKDDLLHIPISIRLCSHCIDMLFIGRKFNKDVR-- 307

  Fly   266 RTCRPL--LVQVYEQIRQLQKEVTPDLDMYLKIINSL------NEGDTI--FTLADAGALRGKIG 320
               .||  :...|:.::.:.|.:...|.::...:|||      :..:|:  ..|.|...||.|:.
Yeast   308 ---MPLSGIFAKYDSMQNISKVIDSLLPIFEDSLNSLKVETAKDSENTLDPKNLNDLARLRHKLL 369

  Fly   321 QVAEAMDMRSKRILAIFCEPGSR-EEALKKAIRLGCIQAIKERMLSLPPLP----EESHIRQMQE 380
            ......:..::::|::  ||.|. |..|:.:|::.....|.|::|.|..||    .|.| :..::
Yeast   370 NSFNLYNTLTRQLLSV--EPQSHLERQLQNSIKIASAAYINEKILPLKSLPAILNPEGH-KTNED 431

  Fly   381 RRRMETE----QRILTEQRMAMEAYE-RNNMAANQSNVGVPGPESGSFAQGSDLQSLNNWSAPQA 440
            .::.|.|    .:::.|.....|..| |..:..                                
Yeast   432 GQKAEPEVKKLSQLMIENLTIKEVKELREELMV-------------------------------- 464

  Fly   441 ASKSSLDDPLIEQINIIKGYIKQARQDMNFEVVETLELNLRELQREVYERQ 491
                     |.||..:|:..|:..::....|.:.||..||.||...::..|
Yeast   465 ---------LKEQSYLIESTIQDYKKQRRLEEIVTLNKNLEELHSRIHTVQ 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbsn-5NP_609186.1 FYVE_RBNS5 174..259 CDD:277256 31/98 (32%)
Rbsn 449..487 CDD:288341 12/37 (32%)
PEP7NP_010610.3 FYVE1_Vac1p_like 65..141 CDD:277300 13/78 (17%)
FYVE2_Vac1p_like 211..293 CDD:277276 29/86 (34%)
Rbsn 467..502 CDD:402875 11/34 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 55 1.000 Domainoid score I2737
eggNOG 1 0.900 - - E1_KOG1842
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005770
OrthoInspector 1 1.000 - - oto99272
orthoMCL 1 0.900 - - OOG6_105165
Panther 1 1.100 - - LDO PTHR13510
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8149
SonicParanoid 1 1.000 - - X4165
TreeFam 00.000 Not matched by this tool.
109.840

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