DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rbsn-5 and FAB1B

DIOPT Version :9

Sequence 1:NP_609186.1 Gene:Rbsn-5 / 34110 FlyBaseID:FBgn0261064 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_001319548.1 Gene:FAB1B / 820647 AraportID:AT3G14270 Length:1791 Species:Arabidopsis thaliana


Alignment Length:118 Identity:33/118 - (27%)
Similarity:48/118 - (40%) Gaps:31/118 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 NKLIIRLHRLLKD-LPADSVQRRQHEQQTVA---WLDGSSVKLCPSCAKSFHIARRQHHCRLCGG 207
            |:....:..|:|. ||..|      |..||:   |:...|.::|..|...|.:..|:||||.||.
plant     8 NRTFSEIVGLIKSWLPWRS------EPATVSRDFWMPDQSCRVCYECDCQFTLINRRHHCRHCGR 66

  Fly   208 IMCNDCS----KFLPLEDAMQLASLSTTRSEPLQQLHQHENAIRLCEHCL--W 254
            :.|..|:    .|.|       :.|.|.|.:        ...||:|.:|.  |
plant    67 VFCGKCTANSIPFAP-------SDLRTPRED--------WERIRVCNYCFRQW 104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbsn-5NP_609186.1 FYVE_RBNS5 174..259 CDD:277256 26/90 (29%)
Rbsn 449..487 CDD:288341
FAB1BNP_001319548.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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