DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbsn-5 and rbsn

DIOPT Version :9

Sequence 1:NP_609186.1 Gene:Rbsn-5 / 34110 FlyBaseID:FBgn0261064 Length:505 Species:Drosophila melanogaster
Sequence 2:XP_697706.2 Gene:rbsn / 569240 -ID:- Length:782 Species:Danio rerio


Alignment Length:527 Identity:158/527 - (29%)
Similarity:253/527 - (48%) Gaps:82/527 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SGEILEGFLCPICRADLKSIDVLTDHFARQHAEEE----DALKSFKDIFTKAKKKILNPFEDEKG 76
            |.|:.||||||:|..||:|...|.||:..:||.:.    ..||:......|||.|:|....||: 
Zfish    12 SAEVKEGFLCPLCFKDLQSFYQLQDHYEEEHAGDSRHVGGQLKNLVQKAKKAKDKLLKRDGDER- 75

  Fly    77 ASVSSPAGSSSSAAGKNPNGNGDRNGPSNARSRLNVFNYM-ARQQPGAECSHFEYFQSIRNPRLE 140
               :..:..|....|.:|                    || ..|:.||..||.:||:..|..|::
Zfish    76 ---TDSSYESFYYGGVDP--------------------YMWEPQELGATRSHLDYFKKQRAARID 117

  Fly   141 RYASETNKLIIRLHRL--LKDLPADSVQRRQHEQQTVAWLDGSSVKLCPSCAKSFHIARRQHHCR 203
            .|..|.||.||||.:|  ......|:.|.|..|:..|:|::...|..||.|...|::..|:||||
Zfish   118 HYVIEVNKCIIRLEKLTSFDRTNMDAAQIRSLEKSVVSWVNDQDVPFCPDCGGKFNLRNRRHHCR 182

  Fly   204 LCGGIMCNDCSKFLPLEDAMQLAS-----------------------LSTTRSEPLQQL------ 239
            |||.|||..|::|:||..|.:|.|                       ..|:|...:..:      
Zfish   183 LCGSIMCRKCTEFVPLPMAYKLTSGTREALWAPGSGGSPVSTGQAVVQQTSRRGSISSISSVTSV 247

  Fly   240 --HQHENAIRLCEHCLWLLDTRKDMHESRTCRPLLVQVYEQIRQLQKEVTPDLDMYLKIINSLNE 302
              .:.|:.:|.|.||:..|...:...|.:...|.:|::||::|....:|......|.::..|||.
Zfish   248 LEEKDEDRVRCCHHCMDALLRHQRKLEEKDHVPDIVKLYERLRTCMDKVEAKAPEYTRMAESLNA 312

  Fly   303 GDTIFTLADAGALRGKIGQVAEAMDMRSKRILAIFCEPGSREE--------ALKKAIRLGCIQAI 359
            |:..::|....|||.:|.:..|.:|:.||:||.:    |.:||        .|::.:|......|
Zfish   313 GEKTYSLESTAALRMEIQKYYELIDVLSKKILTL----GLKEELQPHPKALQLQRMVRYTATLFI 373

  Fly   360 KERMLSLPPLPEESHIRQMQERRRMETEQRILTEQRMAMEAYERN-NMAANQSNVGVPGPESGSF 423
            :|::|.|..||.:....:::|:||:|.|:|...|:::::|:::|. ....|:..|.|.|.     
Zfish   374 QEKLLGLTSLPTKEKYEELKEKRRVEQEKRAQQERQVSLESHKRRLENEKNRPTVSVNGD----- 433

  Fly   424 AQGSDLQSLNNWSAPQAASKSSLDDPLIEQINIIKGYIKQARQDMNFEVVETLELNLRELQREVY 488
            .....:.....| .||:.::|..||||::||..|:.:::|||.....:.|..||.|||:||.| :
Zfish   434 VAAPRVTKAGGW-LPQSDTRSEQDDPLLQQIENIESFLRQARSANRSDEVCMLEENLRQLQDE-F 496

  Fly   489 ERQRQSQ 495
            :.|:.|:
Zfish   497 DAQQTSR 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbsn-5NP_609186.1 FYVE_RBNS5 174..259 CDD:277256 33/115 (29%)
Rbsn 449..487 CDD:288341 16/37 (43%)
rbsnXP_697706.2 FYVE_RBNS5 153..>199 CDD:277256 21/45 (47%)
Rbsn 458..497 CDD:288341 17/39 (44%)
NPF 595..736 CDD:293209
Rbsn 738..774 CDD:288341
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593601
Domainoid 1 1.000 76 1.000 Domainoid score I8967
eggNOG 1 0.900 - - E1_KOG1842
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41477
Inparanoid 1 1.050 222 1.000 Inparanoid score I3518
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005770
OrthoInspector 1 1.000 - - oto41733
orthoMCL 1 0.900 - - OOG6_105165
Panther 1 1.100 - - LDO PTHR13510
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8149
SonicParanoid 1 1.000 - - X4165
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.780

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