DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbsn-5 and plekhf1

DIOPT Version :10

Sequence 1:NP_609186.1 Gene:Rbsn-5 / 34110 FlyBaseID:FBgn0261064 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_001016010.1 Gene:plekhf1 / 548764 XenbaseID:XB-GENE-996039 Length:269 Species:Xenopus tropicalis


Alignment Length:143 Identity:32/143 - (22%)
Similarity:65/143 - (45%) Gaps:39/143 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 LHRLLKDLPADSVQRRQHEQQTVAWLDGSSVKLCPSCAK-SFHIARRQHHCRLCGGIMCNDCSKF 216
            :|:||:     ...|:..::....|:...:..:|..|.: :|.:..|:||||.||.::|::|||:
 Frog   130 IHQLLQ-----KTGRQPSKEHAAPWIPDKATDICMRCTQTNFTLVNRRHHCRKCGFVVCHECSKY 189

  Fly   217 LPLEDAMQLASLSTTRSEPLQQLHQHENAIRLCEHCLWLLDTRKDMHESRTCRPLLVQVYEQIRQ 281
            ..|        :.|.:|:|          :|:|..|...|.:.|            |.:.|::::
 Frog   190 KFL--------IPTIKSKP----------VRVCSLCYKKLVSEK------------VAIEEEVKR 224

  Fly   282 LQK---EVTPDLD 291
            .::   :..|:.|
 Frog   225 HERQFHDAVPEYD 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbsn-5NP_609186.1 FYVE_RBNS5 174..259 CDD:277256 23/85 (27%)
Rbsn 452..490 CDD:463283
plekhf1NP_001016010.1 PH_Phafin2-like 7..129 CDD:269927
FYVE_like_SF 148..211 CDD:333710 22/80 (28%)
Blue background indicates that the domain is not in the aligned region.

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