DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbsn-5 and exc-5

DIOPT Version :10

Sequence 1:NP_609186.1 Gene:Rbsn-5 / 34110 FlyBaseID:FBgn0261064 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_001294029.1 Gene:exc-5 / 177692 WormBaseID:WBGene00001366 Length:861 Species:Caenorhabditis elegans


Alignment Length:368 Identity:67/368 - (18%)
Similarity:109/368 - (29%) Gaps:143/368 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 SNARSRLNVFNYMARQQPGAECSHFEYFQSIRNPRLERYAS-----------------------E 145
            ::.|..:.|..|..|....|  ||   .|......|||..|                       |
 Worm   576 ASERKMIGVSKYKLRAVFSA--SH---MQVCEGDNLEREHSFYLRGSDGTGPKRCVELFTPTQKE 635

  Fly   146 TNKLIIRLHRLLKDLPADSVQRRQHEQQTVAWLDGSSV--KLCPSCAKSFHIARRQHHCRLCGGI 208
            .|..:..:..::.:..|.|:......:.:::..:.:|:  |.|..|...|....|...|..|...
 Worm   636 KNDWVDSIFSIIDEAKAHSLTFTSSSRSSISENNNNSIESKHCADCDIEFGFLSRGSKCVKCSRR 700

  Fly   209 MCNDCSKFLPLEDAMQLASLSTTRSEPLQQLHQHENAIRLCEHCLWLLD----TRKDMHESRTCR 269
            :|..|              ....|:|..:.        |:|:.|...:|    .|....:|...|
 Worm   701 LCKKC--------------FGRRRNESKKH--------RICDTCTKNMDLDGIPRSFSTQSNMRR 743

  Fly   270 PLL--------VQVYEQIRQLQKEVTPDLDMYLKIINSLNEGDTIFTLADAGALRGKIGQVAEAM 326
            .||        |....|||                                  .||.:|::.:  
 Worm   744 NLLQLPAKGSGVLHSSQIR----------------------------------FRGSLGKLLD-- 772

  Fly   327 DMRSKRILAI---FC-EPGSREEALKKAIRLGCIQAIKERMLSLPPLPEESHIRQMQER------ 381
                 |.:.:   || ...|.||.:       |       .|::.||| ...::...|:      
 Worm   773 -----RFMVVRDDFCMYTYSSEEDI-------C-------ALAMLPLP-GCEVKMCGEKFTFSVR 817

  Fly   382 ---RRM--------ETEQRILTEQRMAMEAYERN--NMAANQS 411
               |||        :|:.:.|....:|..|:.:|  |..:.||
 Worm   818 VGARRMYTMTAEDEQTQMKWLAILDLAANAHLKNQRNSGSEQS 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbsn-5NP_609186.1 FYVE_RBNS5 174..259 CDD:277256 16/90 (18%)
Rbsn 452..490 CDD:463283
exc-5NP_001294029.1 RhoGEF 336..514 CDD:214619
PH1_FGD1-4_like 545..643 CDD:275423 14/71 (20%)
FYVE 676..727 CDD:214499 14/72 (19%)
PH-like <773..845 CDD:473070 17/86 (20%)
Blue background indicates that the domain is not in the aligned region.

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