DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbsn-5 and aka-1

DIOPT Version :10

Sequence 1:NP_609186.1 Gene:Rbsn-5 / 34110 FlyBaseID:FBgn0261064 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_495565.2 Gene:aka-1 / 174216 WormBaseID:WBGene00000101 Length:1284 Species:Caenorhabditis elegans


Alignment Length:521 Identity:101/521 - (19%)
Similarity:169/521 - (32%) Gaps:169/521 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NPFDSDEDQSSASGEILEGFLCPICRADLKSIDVLTDHFARQHAEEEDALKSF--------KDIF 60
            |..:...:.:|.||.:||.               :.||.......|..:..||        ....
 Worm   354 NESEDVPESNSTSGTVLEN---------------IEDHLESDVVIENGSESSFVNEKMNEASTAH 403

  Fly    61 TKAKKKILNPFE---DEKGASVSSPAGSSSSAAGKNPNGNGDRNGPSNARSRLNVFNYMAR---Q 119
            ..|::.:::..|   :.:.....||..:.||.     |.|.|......::|..:|.|....   :
 Worm   404 LVAEQSVVDDSEIHLETEDQETLSPETADSST-----NKNSDEFPDEGSQSEASVNNEEVLENVE 463

  Fly   120 QPGAECSHFEYFQSIRNPRLERYASET-------NKLIIRLHRLLKDLPADSVQRRQHEQQTVA- 176
            ....||:..:......:..:|....|.       :..|..:|.|.:....:|...|:..:.|.: 
 Worm   464 HVEDECTVVDAVNENTDSSIEENDEENTENRPRFDSSIATIHVLHESDSDESATPRRERRLTESE 528

  Fly   177 ---------WLDGSSVKLCPSCAKSFHIARRQHHCRLCGGIMCNDC---SKFLPLEDAMQLASLS 229
                     |:..|....|..|...|.|..|:||||.||.::|..|   ..||            
 Worm   529 LQLGKTSPYWIPDSECPNCMLCNTRFTIITRRHHCRACGRVLCGSCCNEKAFL------------ 581

  Fly   230 TTRSEPLQQLHQHENAIRLCEHCLWLLDTRKDMHESRTCRPLLVQVYEQIRQLQKEVTPDLDMYL 294
                |.||:..:...|:|:|:.|..:|              ..::.:||..|.::|       .:
 Worm   582 ----EYLQEEGKKLQAVRVCKPCSAML--------------ARIETHEQDEQRRRE-------SI 621

  Fly   295 KIINSLNEGDTIFTLADA------GALRGK--------------------IGQVAEAMDMRSKRI 333
            ...|.|:..:||.::..|      |.|:.|                    .|.|::     |.|.
 Worm   622 ASENGLSGDETISSIPAASTSIPRGVLKTKPTVHVNEEDGASTSSQAHSTSGNVSD-----SSRR 681

  Fly   334 LAIF---------CEPGSREEALKKAIRLGCIQAIKERMLSLPPLPEESHIRQMQERRRMETEQR 389
            ..:|         .:.|:.||               ||..:|.|        :.:.|:|....:|
 Worm   682 SVMFRDGVRPGAPADEGNPEE---------------ERSTALKP--------KKKSRKRTSVVRR 723

  Fly   390 ILTEQRMAMEAYERNNMAANQSNVGV-------PGPESGSFAQGSD-LQSLNNWSAPQAASKSSL 446
            | .|.||      .:.:|......|:       |..|...|...|. |::|.|:|......|.:|
 Worm   724 I-AELRM------EDELACALPKEGITKLLIVKPDCEHPKFEDASTVLETLCNFSVVTVVLKKNL 781

  Fly   447 D 447
            :
 Worm   782 N 782

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbsn-5NP_609186.1 FYVE_RBNS5 174..259 CDD:277256 26/97 (27%)
Rbsn 452..490 CDD:463283
aka-1NP_495565.2 PTZ00341 <334..>477 CDD:173534 25/142 (18%)
FYVE_endofin 532..604 CDD:277268 24/87 (28%)
DUF3480 905..1258 CDD:463419
Blue background indicates that the domain is not in the aligned region.

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