DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbsn-5 and FGD4

DIOPT Version :10

Sequence 1:NP_609186.1 Gene:Rbsn-5 / 34110 FlyBaseID:FBgn0261064 Length:505 Species:Drosophila melanogaster
Sequence 2:XP_047284247.1 Gene:FGD4 / 121512 HGNCID:19125 Length:922 Species:Homo sapiens


Alignment Length:286 Identity:63/286 - (22%)
Similarity:103/286 - (36%) Gaps:102/286 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 DALKSFKDIFTKAK------------KKILNPFE---DEKGASVSSPA------GSSSSAAGKNP 94
            ||.||.:.|.|.|.            ||:|..:|   :|:  .:.:|:      |.....|.:| 
Human   531 DAKKSLEIISTAASHSNSAIRKMENLKKLLEIYEMLGEEE--DIVNPSNELIKEGQILKLAARN- 592

  Fly    95 NGNGDRNGPSNARSR-LNVFNYM----------------ARQQPG------AECSHFEY---FQ- 132
                     ::|:.| |.:||.|                .|.:.|      .|..:.||   || 
Human   593 ---------TSAQERYLFLFNNMLLYCVPKFSLVGSKFTVRTRVGIDGMKIVETQNEEYPHTFQV 648

  Fly   133 SIRNPRLERYAS-------------ETNKLIIRLHRLLKDLPA------DSVQRRQHEQQTVAWL 178
            |.:...||..||             ||.....:.|...::..|      ..|...:..::...|:
Human   649 SGKERTLELQASSAQDKEEWIKALQETIDAFHQRHETFRNAIAKDNDIHSEVSTAELGKRAPRWI 713

  Fly   179 DGSSVKLCPSCAKSFH-IARRQHHCRLCGGIMCNDCSKF-LPLE-DAMQLASLSTTRSEPLQQLH 240
            ..:.|.:|..|.:.|: :.||:||||.||.::|..||.: ..|| |..:|:              
Human   714 RDNEVTMCMKCKEPFNALTRRRHHCRACGYVVCWKCSDYKAQLEYDGGKLS-------------- 764

  Fly   241 QHENAIRLCEHCLWLLDTRKDMHESR 266
                  ::|:.|..::....|..|.:
Human   765 ------KVCKDCYQIISGFTDSEEKK 784

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbsn-5NP_609186.1 FYVE_RBNS5 174..259 CDD:277256 22/87 (25%)
Rbsn 452..490 CDD:463283
FGD4XP_047284247.1 RhoGEF 363..547 CDD:238091 7/15 (47%)
PH1_FDG4 579..672 CDD:275434 21/102 (21%)
FYVE_FGD1_2_4 710..774 CDD:277280 22/83 (27%)
PH2_FGD1-4 793..895 CDD:270056
Blue background indicates that the domain is not in the aligned region.

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