DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbsn-5 and rbsn

DIOPT Version :9

Sequence 1:NP_609186.1 Gene:Rbsn-5 / 34110 FlyBaseID:FBgn0261064 Length:505 Species:Drosophila melanogaster
Sequence 2:XP_002938281.3 Gene:rbsn / 100496168 XenbaseID:XB-GENE-1006247 Length:817 Species:Xenopus tropicalis


Alignment Length:551 Identity:156/551 - (28%)
Similarity:252/551 - (45%) Gaps:90/551 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PFDS----DEDQSSASGEILEGFLCPICRADLKSIDVLTDHFARQHAEEEDA---LKSFKDIFTK 62
            |:.|    ||     .||:.||||||:|..||:|...|..|:..:|:|:.|.   |||...|..|
 Frog    57 PYTSMASFDE-----QGEVREGFLCPLCLKDLQSFYQLQSHYEEEHSEDRDVKGQLKSLVQIAKK 116

  Fly    63 AKKKILNPFEDEKGASVSSPAGSSSSAAGKNPNGNGDRNGPSNARSRLNVFNY-------MARQQ 120
            ||.|:|                          ..:|.......::.|...::|       ...|:
 Frog   117 AKNKLL--------------------------KRDGGERAEGGSQERYEAYSYGGVDPCMWDPQE 155

  Fly   121 PGAECSHFEYFQSIRNPRLERYASETNKLIIRLHRL--LKDLPADSVQRRQHEQQTVAWLDGSSV 183
            .||..||...|:..|..|::.|..|.|||||||.:|  ...:..:||:.|..|:..|:|:....|
 Frog   156 IGAMRSHLSNFKRHRAARIDHYVVEVNKLIIRLEKLTSFDRVNTESVKIRAIEKSVVSWVSDQDV 220

  Fly   184 KLCPSCAKSFHIARRQHHCRLCGGIMCNDCSKFLPLEDAMQLASLS------------------- 229
            ..||.|...|.|..|:|||||||.|||..|::.:.|..|.:|.|.|                   
 Frog   221 PFCPDCGNKFTIRNRRHHCRLCGSIMCKRCTELITLPFASKLTSASKHSLSAHGSPNLSPSSSAQ 285

  Fly   230 TTRSEPLQQL--------HQHENAIRLCEHCLWLLDTRKDMHESRTCRPLLVQVYEQIRQLQKEV 286
            |:|...:..|        .:.::.||.|.||...|..|:...:.:...|.:|:.|:::|...::|
 Frog   286 TSRRGSISSLSSVSSVLEEKDDDKIRCCHHCKDTLLKREQQLDEKEHTPEIVKYYQKLRSCMEKV 350

  Fly   287 TPDLDMYLKIINSLNEGDTIFTLADAGALRGKIGQVAEAMDMRSKRILAIFC----EPGSREEAL 347
            ......|:|:..|:|.|:|.:.|.....||.::.:..|.:|..||:||.:..    :|..:.:.|
 Frog   351 DEKAPEYIKMAQSINAGETTYNLDHTNNLRVELQKYYELIDALSKKILTLGMNEEPKPHPKTQQL 415

  Fly   348 KKAIRLGCIQAIKERMLSLPPLPEESHIRQMQERRRMETEQRILTEQRMAMEAYERNNMAANQSN 412
            :|.:|......::|::|.|..||.:....:::::||.|.||::..|::  .||.:    |.:...
 Frog   416 QKMVRYSATLFVQEKLLGLMSLPTKEIYEELKQKRRQENEQKLQRERQ--AEAQK----AGDDKK 474

  Fly   413 VGVPGPESGSFAQGSDLQSLNNWSAPQAASKS-SLDDPLIEQINIIKGYIKQARQDMNFEVVETL 476
            ..|   .:|..:....::.:..|.......:: .:.|||::||..|..||:||:.....:.|:.|
 Frog   475 RDV---RNGGLSPSGQIRKVEGWLPTSGHPRNREMSDPLLQQIENITSYIRQAKDAGRVDEVQML 536

  Fly   477 ELNLRELQREVYERQRQS--QGSTAASPTEA 505
            |.|||:||.|..|:|.::  |.|...:..||
 Frog   537 EDNLRQLQEEYDEQQVETAIQMSKVLAEEEA 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbsn-5NP_609186.1 FYVE_RBNS5 174..259 CDD:277256 34/111 (31%)
Rbsn 449..487 CDD:288341 17/37 (46%)
rbsnXP_002938281.3 FYVE_RBNS5 211..323 CDD:277256 34/111 (31%)
Rbsn 512..548 CDD:371544 16/35 (46%)
NPF 597..770 CDD:374661
Rbsn 774..810 CDD:371544
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 73 1.000 Domainoid score I9091
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41477
Inparanoid 1 1.050 208 1.000 Inparanoid score I3597
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005770
OrthoInspector 1 1.000 - - oto103008
Panther 1 1.100 - - LDO PTHR13510
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4165
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.060

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