DRSC/TRiP Functional Genomics Resources

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Protein Alignment PAPLA1 and Ddhd2

DIOPT Version :10

Sequence 1:NP_609185.1 Gene:PAPLA1 / 34109 FlyBaseID:FBgn0031990 Length:2016 Species:Drosophila melanogaster
Sequence 2:NP_001305345.1 Gene:Ddhd2 / 680971 RGDID:1585818 Length:699 Species:Rattus norvegicus


Alignment Length:703 Identity:284/703 - (40%)
Similarity:403/703 - (57%) Gaps:100/703 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly  1358 SSEKGQVATPPVAIPYSPVVAHWFYKRSVDTKFIWTPFSHYDSALLETS--LNLDDSTLIIPVEG 1420
            ||...::....|...|.||..||||.:.:|:|.:|.||:..||..||.:  ...|.:..::|.:|
  Rat    22 SSSSFELLDMDVGSSYEPVSPHWFYCKVIDSKELWIPFNSEDSQQLEEAHGSGKDCNERVVPTDG 86

  Fly  1421 GRYDVNIKERTKTPVYWEGKAIEVRRCSWFYKG-VDSKYVPYTEDTAALLEAEYKRSAETGEWHQ 1484
            |||||::.||.:..|||:....|||||:||||| .|:|||||:|..:.:||..|..:....||.:
  Rat    87 GRYDVHLGERMRYAVYWDELPSEVRRCTWFYKGDKDNKYVPYSESFSQVLEDTYMLAVTLDEWKK 151

  Fly  1485 KIMLANGEQVVFHGPTVIVHFLPQQNADTWGASTQGSMRPRVVKRDLDDFTIE--QGESQRVDHL 1547
            |:...|.|.:|.|.|.::||:.|...:|.||:::....|||.|||.::...::  .||..::|||
  Rat   152 KLESPNREIIVLHNPKLMVHYQPITGSDEWGSTSTEQGRPRSVKRGVESIPVDIHCGEPLQIDHL 216

  Fly  1548 LFMVHGIGSACDLKMRSVEEVVDDFRVIAQQLVQSHYKNSTDMGLVGRVEVLPISWHGHLHSEEL 1612
            :|:|||||.||||:.||:.:.|:|||.::..|:|:|:|.:.:...:||||.||::||..|||  .
  Rat   217 VFVVHGIGPACDLRFRSIVQCVNDFRSVSLNLLQTHFKKAQENQQIGRVEFLPVNWHSPLHS--T 279

  Fly  1613 GIDEKLKSITLESIPRLRNFTNDTLLDVLFYTSPKYCQKIMNTVADALNDVYLKYRMRHPEFNGG 1677
            |:|..|:.|||.||.|||:|||||:|||.||.||.|||.|::|||..:|.:|..:..|:|:|.||
  Rat   280 GVDIDLQRITLPSINRLRHFTNDTILDVFFYNSPTYCQTIVDTVASEMNRIYTLFLQRNPDFKGG 344

  Fly  1678 VSLAGHSLGSLILFDLLCHQ---------------------------EPLKESE--------EEN 1707
            ||:||||||||||||:|.:|                           |.||:.:        |:.
  Rat   345 VSIAGHSLGSLILFDILTNQKDSIGDIDSEKGSLSTAEDLGDVSTLEEELKKLQLSEFVTVFEKE 409

  Fly  1708 KENPDQL----------------PQK---------QSSQKVQLPTSDP----LPKQVSYAMGPEG 1743
            |.:.:.|                |:|         :||..:..||...    :||:....: ..|
  Rat   410 KVDREALALCTDRDLQEMGIPLGPRKKILNHFSATKSSVGINRPTMSASEVNIPKEKGDYL-DVG 473

  Fly  1744 TGQPVITYTQLIFHPKKFFALGSPIGMFVTIRGIDKLGLDFHLPTCPGFYNIFHPFDPVAYRIEA 1808
            .||..:.|.:|.:.|:.|||.|||||||:|:||:.::..::..|||.||:||:|||||||||||.
  Rat   474 IGQVSVKYPRLNYKPEIFFAFGSPIGMFLTVRGLRRIDPNYKFPTCKGFFNIYHPFDPVAYRIEP 538

  Fly  1809 LVNPDMNGIRPVLIPHHKGRKRMHLELKETMTRVGADIKQRFMDTFKTTLDSVNFLTTVTKVKKE 1873
            :|.|.:. ..|:|||||||||||||||:|.:||:..|:|...:.:.:....|   .|.......:
  Rat   539 MVVPGVE-FEPMLIPHHKGRKRMHLELREGLTRMSMDLKNNLLGSLRMAWKS---FTRAPYPALQ 599

  Fly  1874 AEESLEKETSQTSSQAFQKQTEDQDESSVASSSCKLRNRTDSNSTTASDPEFIELDFPL--GKLN 1936
            |.|..|             .||.:.|.|         :...|::.|...|..::.:.|:  |.||
  Rat   600 ASEMAE-------------DTEAESEPS---------SEKPSDANTEEPPVEVKEEAPINVGMLN 642

  Fly  1937 DSKRVDYVLQEAPLEFINEYIFALSSHVCYWGSEDTILFVMKEIYASLGISTD 1989
            ..:|:||||||.|:|..|||:|||.||:|||.||||:|.|:||||.:.||..|
  Rat   643 GGQRIDYVLQEKPIESFNEYLFALQSHLCYWESEDTVLLVLKEIYQTQGIFLD 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAPLA1NP_609185.1 PHA03247 <38..590 CDD:223021
PHA03247 <375..1012 CDD:223021
Atrophin-1 888..>1179 CDD:460830
WWE 1379..1446 CDD:460715 28/68 (41%)
DDHD 1754..1981 CDD:460725 100/228 (44%)
Ddhd2NP_001305345.1 WWE 43..112 CDD:460715 28/68 (41%)
SAM_superfamily 379..447 CDD:472832 8/67 (12%)
DDHD 484..687 CDD:460725 100/228 (44%)
Blue background indicates that the domain is not in the aligned region.

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