DRSC/TRiP Functional Genomics Resources

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Protein Alignment PAPLA1 and sec23ip

DIOPT Version :10

Sequence 1:NP_609185.1 Gene:PAPLA1 / 34109 FlyBaseID:FBgn0031990 Length:2016 Species:Drosophila melanogaster
Sequence 2:NP_001070847.1 Gene:sec23ip / 560750 ZFINID:ZDB-GENE-030131-5259 Length:977 Species:Danio rerio


Alignment Length:1130 Identity:370/1130 - (32%)
Similarity:525/1130 - (46%) Gaps:311/1130 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1005 PTSANTTILTPAPDTTSTL-FANNIPTTTPSIPDIVPTTSAELVDAPPGFQGSSDDTA--TNLFQ 1066
            |:|:...:.:.||:...:| |   ||.:..:.|.::....|..|.....|.|.:..||  |:.|.
Zfish    10 PSSSANLLFSGAPEFNFSLPF---IPVSQATGPAVLSGEDASEVGEEDSFLGQTTSTAPQTSTFN 71

  Fly  1067 GNTETQTVFSPFAQTKATPLVQETKPELVPPPIGFFAPKS----ESEVLSQPPLAP-----SPLQ 1122
            ..:.|.....|||.     :.|::    .|||...|.|.:    .:.:.:..||.|     :|:|
Zfish    72 YFSNTANSSDPFAS-----IGQQS----CPPPAANFIPSTTGPLPASIAASLPLNPPVSHMNPVQ 127

  Fly  1123 SFFSTAPETATTTDFNFFGSPAPGSVFPDLPVQQGIAPPPLALESPPQNSVSNIATSAIGFDLLN 1187
            .:                     |||....|::....||......|||:|               
Zfish   128 QY---------------------GSVANQAPMRTYTPPPNAPTPPPPQSS--------------- 156

  Fly  1188 QTQQASSLVENSNQNSSVNSFDGYFGGPSASAAQTFANETTNALVAPAINCDPVNFFDQVPQTQS 1252
              ||:.:...::..:|..|.:                      |:||.:...|.:   |.||   
Zfish   157 --QQSYNPYRHTAVSSKANPY----------------------LMAPELQQQPPS---QTPQ--- 191

  Fly  1253 QIQQANEDQRIQNFFNNPPLQDQPAVPGELKYDIVHSGVAVKQLQERSQTPVSNLVEPPSSACSE 1317
                          ..||..|..|.                    ...|||.:...:||      
Zfish   192 --------------HLNPYSQPTPT--------------------PSFQTPPTAFTKPP------ 216

  Fly  1318 FSTLAPAPTQTDRQSGDDLLQQHLGELPEDILRELRMASASSEKGQVATPPVAIPYS-----PVV 1377
             .|..|.|..|...:|.                            .|...|: :||:     ||.
Zfish   217 -PTQIPPPPPTTSMAGP----------------------------LVPANPM-MPYTYNVYEPVQ 251

  Fly  1378 AHWFYKRSVDTKFIWTPFSHYDSALLETSLNL---DDSTLIIPVEGGRYDVNIKERTKTPVYWEG 1439
            .||||.:.|::|.:|.|||..||..||.:.|.   |..::|:..:||||||.:.:||:|.||||.
Zfish   252 PHWFYCKQVESKIVWLPFSILDSIRLEETFNSVQPDPESVIVCTDGGRYDVQLYDRTRTSVYWEE 316

  Fly  1440 KAIEVRRCSWFYKG-VDSKYVPYTEDTAALLEAEYKRSAETGEWHQKIMLANGEQVVFHGPTVIV 1503
            ...|||||:||||| .||:::||:||.:..||||||::..|.:||:::...:||.:|.|.|.|||
Zfish   317 DPTEVRRCTWFYKGDTDSRFIPYSEDFSEKLEAEYKKAVTTNQWHRRLEFPSGETIVMHNPKVIV 381

  Fly  1504 HFLPQQNADTWGASTQGSMRPRVVKRDLDD--FTIEQGESQRVDHLLFMVHGIGSACDLKMRSVE 1566
            .|.|....|.||.:..|..|||||||.:||  ..:..||..:||||:|||||||..|||:.||:.
Zfish   382 QFQPSAVPDEWGTTQDGQTRPRVVKRGVDDDHDEVPDGEMPQVDHLVFMVHGIGPVCDLRFRSMV 446

  Fly  1567 EVVDDFRVIAQQLVQSHYKNSTDMGLVGRVEVLPISWHGHLHSEELGIDEKLKSITLESIPRLRN 1631
            |.|||||.::.:|:.||::.:.|..::.|||.||:.||..||.:..|:|.::|.|||.|..|||:
Zfish   447 ECVDDFRSVSLKLLNSHFRKARDDHVISRVEFLPVHWHTALHGDATGVDRRIKKITLPSTGRLRH 511

  Fly  1632 FTNDTLLDVLFYTSPKYCQKIMNTVADALNDVYLKYRMRHPEFNGGVSLAGHSLGSLILFDLLCH 1696
            |||:||||||||.||.|||.||:|||..:|.::..:..|:|:|.|.||:||||||||||||||.:
Zfish   512 FTNETLLDVLFYNSPTYCQTIMDTVAFEMNRLHTLFMQRNPDFKGRVSVAGHSLGSLILFDLLSN 576

  Fly  1697 QE---------------------------------PLKESEEENKENPDQ--------------- 1713
            |:                                 |:...|||.||..::               
Zfish   577 QKIGSPISAPIFNGNSAPNVKQVNSAPEVQAAEVPPVAAVEEEAKEEEEEETGSLSSVLEAIGLS 641

  Fly  1714 ----------------------------LP------------------------QKQSSQKVQL- 1725
                                        :|                        :::|.:|.:| 
Zfish   642 EYLSIFENEKIDVESLLMCTVDDLKEMSIPLGPRKKLANFIKEKSAKQAARKALKEKSVEKEELK 706

  Fly  1726 ---------PTSDP----LPK-------QVSYAMGPEGTGQPVITYTQLIFHPKKFFALGSPIGM 1770
                     ||.||    ||.       .|.|.....||||..:.|..|.|.|..||||||||||
Zfish   707 QTQAPVQTEPTPDPAINKLPVGRTMSSIHVDYNYFEIGTGQVSVIYHALDFEPVSFFALGSPIGM 771

  Fly  1771 FVTIRGIDKLGLDFHLPTCPGFYNIFHPFDPVAYRIEALVNPDMNGIRPVLIPHHKGRKRMHLEL 1835
            |:|:||::|:...:.||||.||:||:||.||||||||.::.||:: :.|||:||||||||:||||
Zfish   772 FLTVRGVEKIEESYQLPTCKGFFNIYHPLDPVAYRIEPMILPDID-LEPVLVPHHKGRKRLHLEL 835

  Fly  1836 KETMTRVGADIKQRFMDTFKTTLDSVNFLTTVTKVKKEAEESLEKETSQTSSQAFQKQTEDQDES 1900
            ||:::|:|:|:||.|:.:.|:...::|..........:..|.|....:|..::  ::....::||
Zfish   836 KESLSRMGSDLKQGFISSLKSAWQTLNEFARAHTSSVQLHEQLAMVANQIKAE--EEMQRGEEES 898

  Fly  1901 SVASSSCKLRNRTDSNSTTASDPEFIELD-FPLGKLNDSKRVDYVLQEAPLEFINEYIFALSSHV 1964
            .:..|               .:|:..|.. ..:|.||...|:||||||.|:|..|||:|||.||:
Zfish   899 KMLES---------------PEPQKEEESRIKVGLLNGGNRIDYVLQEKPIESFNEYLFALQSHL 948

  Fly  1965 CYWGSEDTILFVMKEIYASLGISTD 1989
            |||.||||.|.::||||.|:.|..|
Zfish   949 CYWESEDTALLLLKEIYKSMNIQPD 973

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAPLA1NP_609185.1 PHA03247 <38..590 CDD:223021
PHA03247 <375..1012 CDD:223021 2/6 (33%)
Atrophin-1 888..>1179 CDD:460830 42/185 (23%)
WWE 1379..1446 CDD:460715 32/69 (46%)
DDHD 1754..1981 CDD:460725 101/227 (44%)
sec23ipNP_001070847.1 WWE 253..323 CDD:460715 32/69 (46%)
SAM_superfamily 628..688 CDD:472832 1/59 (2%)
DDHD 755..965 CDD:460725 101/227 (44%)
Blue background indicates that the domain is not in the aligned region.

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