DRSC/TRiP Functional Genomics Resources

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Protein Alignment PAPLA1 and sec23ip

DIOPT Version :9

Sequence 1:NP_609185.1 Gene:PAPLA1 / 34109 FlyBaseID:FBgn0031990 Length:2016 Species:Drosophila melanogaster
Sequence 2:NP_001070847.1 Gene:sec23ip / 560750 ZFINID:ZDB-GENE-030131-5259 Length:977 Species:Danio rerio


Alignment Length:1130 Identity:370/1130 - (32%)
Similarity:525/1130 - (46%) Gaps:311/1130 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1005 PTSANTTILTPAPDTTSTL-FANNIPTTTPSIPDIVPTTSAELVDAPPGFQGSSDDTA--TNLFQ 1066
            |:|:...:.:.||:...:| |   ||.:..:.|.::....|..|.....|.|.:..||  |:.|.
Zfish    10 PSSSANLLFSGAPEFNFSLPF---IPVSQATGPAVLSGEDASEVGEEDSFLGQTTSTAPQTSTFN 71

  Fly  1067 GNTETQTVFSPFAQTKATPLVQETKPELVPPPIGFFAPKS----ESEVLSQPPLAP-----SPLQ 1122
            ..:.|.....|||.     :.|::    .|||...|.|.:    .:.:.:..||.|     :|:|
Zfish    72 YFSNTANSSDPFAS-----IGQQS----CPPPAANFIPSTTGPLPASIAASLPLNPPVSHMNPVQ 127

  Fly  1123 SFFSTAPETATTTDFNFFGSPAPGSVFPDLPVQQGIAPPPLALESPPQNSVSNIATSAIGFDLLN 1187
            .:                     |||....|::....||......|||:|               
Zfish   128 QY---------------------GSVANQAPMRTYTPPPNAPTPPPPQSS--------------- 156

  Fly  1188 QTQQASSLVENSNQNSSVNSFDGYFGGPSASAAQTFANETTNALVAPAINCDPVNFFDQVPQTQS 1252
              ||:.:...::..:|..|.:                      |:||.:...|.:   |.||   
Zfish   157 --QQSYNPYRHTAVSSKANPY----------------------LMAPELQQQPPS---QTPQ--- 191

  Fly  1253 QIQQANEDQRIQNFFNNPPLQDQPAVPGELKYDIVHSGVAVKQLQERSQTPVSNLVEPPSSACSE 1317
                          ..||..|..|.                    ...|||.:...:||      
Zfish   192 --------------HLNPYSQPTPT--------------------PSFQTPPTAFTKPP------ 216

  Fly  1318 FSTLAPAPTQTDRQSGDDLLQQHLGELPEDILRELRMASASSEKGQVATPPVAIPYS-----PVV 1377
             .|..|.|..|...:|.                            .|...|: :||:     ||.
Zfish   217 -PTQIPPPPPTTSMAGP----------------------------LVPANPM-MPYTYNVYEPVQ 251

  Fly  1378 AHWFYKRSVDTKFIWTPFSHYDSALLETSLNL---DDSTLIIPVEGGRYDVNIKERTKTPVYWEG 1439
            .||||.:.|::|.:|.|||..||..||.:.|.   |..::|:..:||||||.:.:||:|.||||.
Zfish   252 PHWFYCKQVESKIVWLPFSILDSIRLEETFNSVQPDPESVIVCTDGGRYDVQLYDRTRTSVYWEE 316

  Fly  1440 KAIEVRRCSWFYKG-VDSKYVPYTEDTAALLEAEYKRSAETGEWHQKIMLANGEQVVFHGPTVIV 1503
            ...|||||:||||| .||:::||:||.:..||||||::..|.:||:::...:||.:|.|.|.|||
Zfish   317 DPTEVRRCTWFYKGDTDSRFIPYSEDFSEKLEAEYKKAVTTNQWHRRLEFPSGETIVMHNPKVIV 381

  Fly  1504 HFLPQQNADTWGASTQGSMRPRVVKRDLDD--FTIEQGESQRVDHLLFMVHGIGSACDLKMRSVE 1566
            .|.|....|.||.:..|..|||||||.:||  ..:..||..:||||:|||||||..|||:.||:.
Zfish   382 QFQPSAVPDEWGTTQDGQTRPRVVKRGVDDDHDEVPDGEMPQVDHLVFMVHGIGPVCDLRFRSMV 446

  Fly  1567 EVVDDFRVIAQQLVQSHYKNSTDMGLVGRVEVLPISWHGHLHSEELGIDEKLKSITLESIPRLRN 1631
            |.|||||.::.:|:.||::.:.|..::.|||.||:.||..||.:..|:|.::|.|||.|..|||:
Zfish   447 ECVDDFRSVSLKLLNSHFRKARDDHVISRVEFLPVHWHTALHGDATGVDRRIKKITLPSTGRLRH 511

  Fly  1632 FTNDTLLDVLFYTSPKYCQKIMNTVADALNDVYLKYRMRHPEFNGGVSLAGHSLGSLILFDLLCH 1696
            |||:||||||||.||.|||.||:|||..:|.::..:..|:|:|.|.||:||||||||||||||.:
Zfish   512 FTNETLLDVLFYNSPTYCQTIMDTVAFEMNRLHTLFMQRNPDFKGRVSVAGHSLGSLILFDLLSN 576

  Fly  1697 QE---------------------------------PLKESEEENKENPDQ--------------- 1713
            |:                                 |:...|||.||..::               
Zfish   577 QKIGSPISAPIFNGNSAPNVKQVNSAPEVQAAEVPPVAAVEEEAKEEEEEETGSLSSVLEAIGLS 641

  Fly  1714 ----------------------------LP------------------------QKQSSQKVQL- 1725
                                        :|                        :::|.:|.:| 
Zfish   642 EYLSIFENEKIDVESLLMCTVDDLKEMSIPLGPRKKLANFIKEKSAKQAARKALKEKSVEKEELK 706

  Fly  1726 ---------PTSDP----LPK-------QVSYAMGPEGTGQPVITYTQLIFHPKKFFALGSPIGM 1770
                     ||.||    ||.       .|.|.....||||..:.|..|.|.|..||||||||||
Zfish   707 QTQAPVQTEPTPDPAINKLPVGRTMSSIHVDYNYFEIGTGQVSVIYHALDFEPVSFFALGSPIGM 771

  Fly  1771 FVTIRGIDKLGLDFHLPTCPGFYNIFHPFDPVAYRIEALVNPDMNGIRPVLIPHHKGRKRMHLEL 1835
            |:|:||::|:...:.||||.||:||:||.||||||||.::.||:: :.|||:||||||||:||||
Zfish   772 FLTVRGVEKIEESYQLPTCKGFFNIYHPLDPVAYRIEPMILPDID-LEPVLVPHHKGRKRLHLEL 835

  Fly  1836 KETMTRVGADIKQRFMDTFKTTLDSVNFLTTVTKVKKEAEESLEKETSQTSSQAFQKQTEDQDES 1900
            ||:::|:|:|:||.|:.:.|:...::|..........:..|.|....:|..::  ::....::||
Zfish   836 KESLSRMGSDLKQGFISSLKSAWQTLNEFARAHTSSVQLHEQLAMVANQIKAE--EEMQRGEEES 898

  Fly  1901 SVASSSCKLRNRTDSNSTTASDPEFIELD-FPLGKLNDSKRVDYVLQEAPLEFINEYIFALSSHV 1964
            .:..|               .:|:..|.. ..:|.||...|:||||||.|:|..|||:|||.||:
Zfish   899 KMLES---------------PEPQKEEESRIKVGLLNGGNRIDYVLQEKPIESFNEYLFALQSHL 948

  Fly  1965 CYWGSEDTILFVMKEIYASLGISTD 1989
            |||.||||.|.::||||.|:.|..|
Zfish   949 CYWESEDTALLLLKEIYKSMNIQPD 973

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAPLA1NP_609185.1 WWE 1377..1446 CDD:280915 32/71 (45%)
DDHD 1758..1981 CDD:280937 99/223 (44%)
sec23ipNP_001070847.1 WWE 251..323 CDD:295449 32/71 (45%)
SAM_superfamily 628..688 CDD:301707 1/59 (2%)
SAM 630..683 CDD:197735 1/52 (2%)
DDHD 758..965 CDD:280937 99/224 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591965
Domainoid 1 1.000 208 1.000 Domainoid score I2823
eggNOG 1 0.900 - - E1_KOG2308
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003037
OrthoInspector 1 1.000 - - otm25289
orthoMCL 1 0.900 - - OOG6_104727
Panther 1 1.100 - - LDO PTHR23509
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1772
SonicParanoid 1 1.000 - - X662
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1110.730

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