DRSC/TRiP Functional Genomics Resources

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Protein Alignment PAPLA1 and sec23ip

DIOPT Version :9

Sequence 1:NP_609185.1 Gene:PAPLA1 / 34109 FlyBaseID:FBgn0031990 Length:2016 Species:Drosophila melanogaster
Sequence 2:XP_031760726.1 Gene:sec23ip / 100158641 XenbaseID:XB-GENE-969266 Length:998 Species:Xenopus tropicalis


Alignment Length:1158 Identity:387/1158 - (33%)
Similarity:531/1158 - (45%) Gaps:324/1158 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   981 GPPSVSSLFSPSQVDSTSSLFAPP--PTSANTTILTPAPDTT-----STLFANNIPTTTPSIPDI 1038
            |||..:.|||.|::.     |:.|  |.|.:...:.|:.|..     .:.......||.|     
 Frog    12 GPPGNNLLFSASEIS-----FSLPFIPVSQHGPAMLPSDDAAEVGEEDSFLGQTSATTNP----- 66

  Fly  1039 VPTTSAELVDAPPGFQGSSDDTATNLFQGNTETQTVFSPFAQTKATPLVQETKPELVPPPIGFFA 1103
             |.|.:.....|.  .|||.|                 |||.....||..|             |
 Frog    67 -PQTFSYFSQGPS--LGSSQD-----------------PFACIWHPPLTTE-------------A 98

  Fly  1104 PKSESEVLSQPPLAPSPLQSFF---STAPETATTTDFNFFGSPAPGSVFPDLPVQQGIAPPPLAL 1165
            |:..:.|..:||.||:|.....   |.||:...|:  |...|.....||  ||..|. .|.|...
 Frog    99 PQPVTSVFFKPPPAPTPEAGHSMIPSKAPKPPVTS--NTPVSQVTAGVF--LPTSQH-GPLPGTY 158

  Fly  1166 ESPPQNSVSNIATSAIGFDLLNQTQQASSLVENSNQNSSVNSFDGYFGGPSASAAQTFANETTNA 1230
            .:||        |:|        :|...:...::.|:|.||.   ||..|               
 Frog   159 SAPP--------TAA--------SQGGYNPYRHNTQSSRVNP---YFAPP--------------- 189

  Fly  1231 LVAPAINCDPVNFFDQVPQTQSQIQQANEDQRIQNFFNNPPLQDQPAVPGELKYDIVHSGVAVKQ 1295
                                     |..:||....|...|||   |.:|        |.|..   
 Frog   190 -------------------------QLLQDQGFAPFIQTPPL---PPLP--------HQGAP--- 215

  Fly  1296 LQERSQTPVSNLVEPPSSACSEFSTLAPAPTQTDRQSGDDLLQQHLGELPEDILRELRMASASSE 1360
                :..|....:.||.:|    ..:.|.|                   |......:|.|..|  
 Frog   216 ----TSPPTGKDLGPPKTA----PHMPPPP-------------------PSQTFPNVRPAGPS-- 251

  Fly  1361 KGQVATPPVAIP--YSPVVAHWFYKRSVDTKFIWTPFSHYDSALLE---TSLNLDDSTLIIPVEG 1420
               |..||..:|  |.||..||||.:.|::|.:|.|||..||..||   .|:..|..::::..:|
 Frog   252 ---VPVPPPYLPNLYEPVQPHWFYCKQVESKEVWLPFSALDSHGLEEVYNSVQPDPESVVVSTDG 313

  Fly  1421 GRYDVNIKERTKTPVYWEGKAIEVRRCSWFYKG-VDSKYVPYTEDTAALLEAEYKRSAETGEWHQ 1484
            |||||.:..|.|..|:||.:..||||||||||| .|||:|||:||.:..||||||::..|.:||:
 Frog   314 GRYDVCLYNREKRAVFWEEEDSEVRRCSWFYKGDADSKFVPYSEDFSERLEAEYKKAVTTNQWHR 378

  Fly  1485 KIMLANGEQVVFHGPTVIVHFLPQQNADTWGASTQGSMRPRVVKR----DLDDFTIEQGESQRVD 1545
            ::....||.:|.|.|.|||.|......|.||:...|..|||||||    :||:  |..||..:.|
 Frog   379 RLEFPGGETIVMHNPKVIVQFQQSLIPDEWGSPQDGQSRPRVVKRGIDAELDE--IPDGEVPQAD 441

  Fly  1546 HLLFMVHGIGSACDLKMRSVEEVVDDFRVIAQQLVQSHYKNSTDMGLVGRVEVLPISWHGHLHSE 1610
            ||:|||||||..|||:.||:.|.|||||.::.:|:|:||:.|.:.|.:.|||.||:.||..||.:
 Frog   442 HLVFMVHGIGPVCDLRFRSIVECVDDFRTVSLKLLQTHYRKSLEEGRMRRVEFLPVHWHSSLHGD 506

  Fly  1611 ELGIDEKLKSITLESIPRLRNFTNDTLLDVLFYTSPKYCQKIMNTVADALNDVYLKYRMRHPEFN 1675
            ..|:|.::|.|||.||.|||:|||:||||:|||.||.|||.|::.|...:|.::..:..|:|:|.
 Frog   507 ATGVDRRIKKITLPSIGRLRHFTNETLLDILFYNSPTYCQTIVDKVNMEMNRLFALFMSRNPDFT 571

  Fly  1676 GGVSLAGHSLGSLILFDLLCHQE-----------------PLKESEEENK-------ENP----- 1711
            ||||:||||||||:|||:|.:|.                 |:|....:.|       |.|     
 Frog   572 GGVSVAGHSLGSLVLFDILSNQTDPTAAPLVPVPPPEANGPIKSKASDEKAVTLQAVEEPSDSEQ 636

  Fly  1712 --------------------------------------DQL--------PQKQSSQKVQ------ 1724
                                                  |.|        |:|:.::.||      
 Frog   637 QKPLPTLREALESLSLAEYSNVFEKEQIDMESLLMCTVDDLKEMGVPLGPRKKIAKFVQERAVTE 701

  Fly  1725 ------------------------------LPTSD----------PLPKQVSYAMGP-------E 1742
                                          ||:|:          .||..||.:..|       .
 Frog   702 AKRKAAEEERAAQIKAKEALAAAAQEAAAKLPSSEDGAAPESNKRKLPVGVSVSSVPVDYEYFET 766

  Fly  1743 GTGQPVITYTQLIFHPKKFFALGSPIGMFVTIRGIDKLGLDFHLPTCPGFYNIFHPFDPVAYRIE 1807
            ||||..:.|..|.|.|..|||||||||||:|:||:||:...|.||||.||:||:||.||||||:|
 Frog   767 GTGQVCVKYNTLDFEPVNFFALGSPIGMFLTVRGLDKIEETFRLPTCKGFFNIYHPLDPVAYRLE 831

  Fly  1808 ALVNPDMNGIRPVLIPHHKGRKRMHLELKETMTRVGADIKQRFMDTFKTTLDSVNFLTTVTKVKK 1872
            .::.||:: ::||||||||||||:||||||::||:|:|:|..|:.:.::...::|..........
 Frog   832 PMILPDID-LKPVLIPHHKGRKRLHLELKESLTRMGSDLKHGFISSLRSAWQTLNDFARAHTSSA 895

  Fly  1873 EAEESLEKETSQTSSQAFQKQTE-DQDESSVASSSCKLRNRTDSNSTTASDPEFIELDFPLGKLN 1936
            :.:..|:|...|...:  :||.| |.|             :.:|..|:..:    ::...:|.||
 Frog   896 QLQLELKKVADQIEEE--EKQQEVDAD-------------KVESPETSREE----DVTVKIGMLN 941

  Fly  1937 DSKRVDYVLQEAPLEFINEYIFALSSHVCYWGSEDTILFVMKEIYASLGISTD 1989
            ..:|:||||||.|:|..|||:|||.||:|||.||||.|.::||||.|:.:..|
 Frog   942 GGRRIDYVLQEKPIESFNEYLFALQSHLCYWESEDTALLILKEIYTSVHVLPD 994

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAPLA1NP_609185.1 WWE 1377..1446 CDD:280915 29/71 (41%)
DDHD 1758..1981 CDD:280937 102/223 (46%)
sec23ipXP_031760726.1 PHA03247 <13..262 CDD:223021 86/401 (21%)
WWE 270..>320 CDD:397111 21/49 (43%)
SAM_sec23ip 632..698 CDD:188983 6/65 (9%)
DDHD 781..986 CDD:397132 102/224 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 282 1.000 Domainoid score I1629
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 629 1.000 Inparanoid score I838
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003037
OrthoInspector 1 1.000 - - otm49024
Panther 1 1.100 - - LDO PTHR23509
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1772
SonicParanoid 1 1.000 - - X662
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.090

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