DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8668 and beta3GalTII

DIOPT Version :10

Sequence 1:NP_609184.1 Gene:CG8668 / 34107 FlyBaseID:FBgn0031988 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_610399.1 Gene:beta3GalTII / 35848 FlyBaseID:FBgn0033315 Length:382 Species:Drosophila melanogaster


Alignment Length:300 Identity:71/300 - (23%)
Similarity:109/300 - (36%) Gaps:73/300 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   305 PVDPSKGVATETLYEPGHVDEEIDAERICPKGGEFIKLLVLISSAMSHDAARMSIRQTWMHY--- 366
            |..|.:.:...|....||:..|:.||:                      |:|:.....|...   
  Fly    83 PYLPEELIYLPTFNAQGHLQVELVAEQ----------------------ASRLRQYTNWQQSLLT 125

  Fly   367 ----GTRRDVGMAFVLGRGTNETINKAL-------TQENFIYGDLIRGNFIDSYNNLTLKTISTL 420
                .|:|.:.:..|...||.:..:.||       .|.|.:   |:.....|:|.|||.|.:.:|
  Fly   126 EGPPRTKRLITVKHVFSIGTLDLSSSALAELEKEQNQNNDL---LLLNRHHDTYKNLTAKLMQSL 187

  Fly   421 EWADVHCPKAKYILKTDDDMFINVPKLLTFL----DKHKDKRTIY--------------GRLAKK 467
            .....|. :..|:||.|||.::.:..|:..|    .|...||:.|              ||...|
  Fly   188 YILRRHY-EFSYMLKVDDDTYVKLDSLVNTLVSYDRKLLRKRSEYRDHVLPQLYWGYFNGRSTIK 251

  Fly   468 WKPIRNKKSKYYVSVDQFAAGVFPSFTTGPAYVLTGDIVHELYVRSLKTVYLKLEDVFTTGIVAK 532
            .|. :.|:|.||:|.:      :..:..|..|||:..:...:...|....:...|||.....:|.
  Fly   252 TKG-QWKESSYYLSKN------YLPYALGGGYVLSRSLCDYIVNNSQLLSHYGSEDVSVGTWLAP 309

  Fly   533 SLNVKRVQANEFVNRRISFNPCNIRNAISVHMI--KSNEQ 570
            ..:|.|.....|   ..|:.|   |...|.||:  |.|.|
  Fly   310 LRHVYRWHDPRF---DTSYAP---RKCRSYHMVLHKRNGQ 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8668NP_609184.1 Galactosyl_T 354..540 CDD:473923 53/217 (24%)
beta3GalTIINP_610399.1 Galactosyl_T 125..319 CDD:473923 50/204 (25%)

Return to query results.
Submit another query.