DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8668 and brn

DIOPT Version :10

Sequence 1:NP_609184.1 Gene:CG8668 / 34107 FlyBaseID:FBgn0031988 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster


Alignment Length:242 Identity:68/242 - (28%)
Similarity:127/242 - (52%) Gaps:8/242 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 KLLVLISSAMSHDAARMSIRQTWMHYGTRRDVGMAFVLGRGTNETINKALTQENFIYGDLIRGNF 405
            :|.:||.||:.:...|.:||:||.:.|...||.:..|...||.|...|.:..|:..:||:::..|
  Fly    79 RLTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLGTAEDSEKDVAWESREHGDILQAEF 143

  Fly   406 IDSYNNLTLKTISTLEWADVHCPKAKYILKTDDDMFINVPKLLTFLDK----HKDKRTIYGRLAK 466
            .|:|.|.||||:..:.||.....::::.|..|||.:::...:|.||.:    |:.:....|.:.:
  Fly   144 TDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKNVLKFLGRGRQSHQPELLFAGHVFQ 208

  Fly   467 KWKPIRNKKSKYYVSVDQFAAGVFPSFTTGPAYVLTGDIVHELYVRSLKTVYLKLEDVFTTGIVA 531
            . .|:|:|.||:|||::::....:|.:.|..|::|:...:.:||..|:.....:.:||: .||||
  Fly   209 T-SPLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKALRQLYAASVHLPLFRFDDVY-LGIVA 271

  Fly   532 KSLNVKRVQANEFVNRRISF-NPCNIRNAISVHMIKSNEQFD-LWKK 576
            ....:.....::|...|.:: .|.:..:.|:.|.....|:.. :|.:
  Fly   272 LKAGISLQHCDDFRFHRPAYKGPDSYSSVIASHEFGDPEEMTRVWNE 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8668NP_609184.1 Galactosyl_T 354..540 CDD:473923 56/189 (30%)
brnNP_476901.1 Galactosyl_T 92..282 CDD:426415 56/191 (29%)

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