DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12375 and Haghl

DIOPT Version :10

Sequence 1:NP_609183.1 Gene:CG12375 / 34106 FlyBaseID:FBgn0031987 Length:292 Species:Drosophila melanogaster
Sequence 2:XP_006246126.1 Gene:Haghl / 302995 RGDID:1308042 Length:310 Species:Rattus norvegicus


Alignment Length:255 Identity:60/255 - (23%)
Similarity:93/255 - (36%) Gaps:77/255 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 DEDVPQYIAHLGDVLQQEKASIDTILLTHWHHDHVGGVKSIV----GTKLAEKDCRVFKFGRTDA 108
            |..||:   .|.::..:|..|:.|:|.||.|.||..|...:.    |..:...|.|:....|.  
  Rat    29 DVAVPK---RLLEIAGREGVSLTTVLSTHHHWDHTRGNAELARLQPGLAIMGADERICALTRR-- 88

  Fly   109 PDVCPEIPTDIKLHPLAHNQEFTTEGANVRVVHTPGHTTDHVVLAMNEG------TLFSGD---- 163
                           |.|.:|......:||.:.|||||:.|:...:.|.      .||||.    
  Rat    89 ---------------LEHGEELQFGAIHVRCLLTPGHTSGHMSYFLWEDECPDPPALFSGTLQPG 138

  Fly   164 ------------------CILGEGTAV------FEDLFEYM-KSLEKIL-DIKPQ-RIFPGHGNV 201
                              |.||:..:|      .||..:.| :||.|.| .:.|| ::|.||   
  Rat   139 LTYQPNSTVSSRPPSDPLCSLGDALSVAGCGWHLEDTAQQMYQSLAKTLGTLPPQTKVFCGH--- 200

  Fly   202 IEEPIGKIEY--YINHRNQREQQILQFFVQRPNENLQAMDVVKVVYKETPENLWPAAAYN 259
             |..:..:|:  .:...|...|..|.:..:|.::::..:          |..|.....||
  Rat   201 -EHTLSNLEFAQKVEPCNSHVQAKLSWAQKRDDDDVPTV----------PSTLGEELMYN 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12375NP_609183.1 LACTB2-like_MBL-fold 13..202 CDD:293808 50/194 (26%)
BLACT_WH 237..274 CDD:407650 4/23 (17%)
HaghlXP_006246126.1 PLN02469 1..272 CDD:178088 60/255 (24%)

Return to query results.
Submit another query.