DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12375 and hagh

DIOPT Version :9

Sequence 1:NP_609183.1 Gene:CG12375 / 34106 FlyBaseID:FBgn0031987 Length:292 Species:Drosophila melanogaster
Sequence 2:XP_031748407.1 Gene:hagh / 100216043 XenbaseID:XB-GENE-966712 Length:333 Species:Xenopus tropicalis


Alignment Length:280 Identity:61/280 - (21%)
Similarity:102/280 - (36%) Gaps:96/280 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TNTYLLGSGSRRILIDTGDEDV-------PQYIAHLGDVLQQEKASIDTILLTHWHHDHVGG--- 84
            |:.|:.      :|||...::.       ||.:.   |.:::....:.|:|.||.|.||.||   
 Frog    81 TDNYMY------LLIDEESKEAAIVDPVQPQKVV---DAVKKHGVKLTTVLTTHHHWDHAGGNEK 136

  Fly    85 -VKSIVGTKLAEKDCRVFKFGRTDAPDVCPEIPTDIKLHPLAHNQEFTTEGANVRVVHTPGHTTD 148
             ||.:.|.|:...|.|:                 ......::|...|.....:|:.::||.||:.
 Frog   137 LVKMVSGLKVYGGDSRI-----------------GALTQKVSHLTTFQVGSLHVKCLYTPCHTSG 184

  Fly   149 HVVLAMNE------GTLFSGDCILGEGTAVFEDLFE------YMKSLEKILDIKPQ-RIFPGHGN 200
            |:...:.:      ..:|:||.:...|...|   ||      |...:|.:..:.|: |::.||  
 Frog   185 HICYYVTKPNSTEPPAVFTGDTLFVAGCGKF---FEGTPEEMYAALIEVLGRLPPETRVYCGH-- 244

  Fly   201 VIEEPIGKIEYYINHRNQREQQILQF--FVQRPNENLQAMDVVKVVYKETPENLWPAAAYNVNHH 263
                     ||.||:        |:|  .|:..|      |.:|      .:..|....||    
 Frog   245 ---------EYTINN--------LKFARHVEPCN------DAIK------QKLAWAKETYN---- 276

  Fly   264 LSKLEKEGKLRVSKSADEEF 283
                  .|:..:..:..|||
 Frog   277 ------SGEPTIPSTLAEEF 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12375NP_609183.1 LACTB2-like_MBL-fold 13..202 CDD:293808 44/195 (23%)
GloB 25..240 CDD:223565 52/235 (22%)
haghXP_031748407.1 PLN02469 72..327 CDD:178088 61/280 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.