DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8673 and b3gnt4

DIOPT Version :10

Sequence 1:NP_609182.1 Gene:CG8673 / 34105 FlyBaseID:FBgn0031986 Length:420 Species:Drosophila melanogaster
Sequence 2:XP_004910572.1 Gene:b3gnt4 / 100491670 XenbaseID:XB-GENE-6039654 Length:363 Species:Xenopus tropicalis


Alignment Length:312 Identity:83/312 - (26%)
Similarity:150/312 - (48%) Gaps:49/312 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 SIDTEVPVRMP-----LVK------TIYKPGHLDSEIDMERICPQKGLSTQLLVLITSSLRHSAA 187
            ::.|.||:..|     :.|      |:.||...:.:             |.||:.|.|...:...
 Frog    66 NLSTLVPLPEPHRLFLMYKHCRNFSTLLKPSKCEKD-------------TFLLLAIKSLPINIER 117

  Fly   188 RMSIRQTWMHYGSRRD-----VGMAFVLGKGKN----KSVKKAIDQEDFMYQDLIRGHFIDSYNN 243
            |::||.||   |.::|     :.:.|:|||..:    ||:::.:..|...::|||:..|:|::.|
 Frog   118 RIAIRNTW---GKQQDIQSKKIKLLFLLGKTDSTLPAKSLRQLLSYESIEFKDLIQWDFVDNFFN 179

  Fly   244 LTLKTISLLEWADLHCPKAKYVLKTDDDMFINVPKLLTLISTLKANRTIY-GRRAENWKPIRNRW 307
            ||||.|.||.|.:..|..||:|||.|||:|||...::..:..|..::.:: |....|..||||..
 Frog   180 LTLKEIHLLRWLNKECSHAKFVLKGDDDVFINTFNIVEFLDGLNPDKDLFVGDVITNAVPIRNTK 244

  Fly   308 SKYHISNAQYGKPTFPYFTTGPAYLLTGDIVHALYVQSLNTAFLKLEDVFTTGIVAESLNI---- 368
            .||.|.::.|..|.:|.:..|..|:::......|...:..|....::||| .|:..|.:|:    
 Frog   245 VKYFIPHSMYSAPHYPLYAGGGGYVMSRKTTKGLLSSAETTDLFPIDDVF-VGMCLEKINVKPQF 308

  Fly   369 ----RRVNVREMANTRTKFETCHIRDKITIHMVRNNEQFTLWNMLLDDTIKC 416
                :...::...|   .|:.|..:..:.:|.:...:.:.:|:::.|:.::|
 Frog   309 HAGFKTFGIQRPGN---PFDPCLYKGLMVVHKLNPTDMWIMWSLVKDEELRC 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8673NP_609182.1 Galactosyl_T 186..374 CDD:473923 63/205 (31%)
b3gnt4XP_004910572.1 Galactosyl_T 116..307 CDD:473923 63/194 (32%)

Return to query results.
Submit another query.