Protein Alignment Trf and Trf5

DIOPT Version :9

• Sequence 1: NP_476939.1
• Gene: Trf / 34102
• FlyBaseID: FBgn0010287
• Length: 224
• Species: Drosophila melanogaster
• Sequence 2: NP_608700.2
• Gene: Trf5 / 33454
• FlyBaseID: FBgn0031446
• Length: 305
• Species: Drosophila melanogaster
• Alignment Length: 230
• Identity: 42/230 - (18%)
• Similarity: 95/230 - (41%)
• Gaps: 19/230 - (8%)

  Fly     6 KVADAERDRDNVAATSNAAANPHAAL-----QPQQP-----VALVEPKDAQHEI-RLQNIV---- 55
            |::.:::|..:....:|.|:.....:     .|::|     :::.|......:| |..|::
  Fly    38 KLSTSDQDPSDRQVLANKASEGAEEMSLPIVNPREPTLKDVLSIYENVSKLGDIQRYLNVIYKPF 102

  Fly    56 -ATFSVNCELDLKAINSRTRNSEYSPKRFRGVIMRMHSPRCTALIFRTGKVICTG-ARNEIEADI 118
             .......:..|..::...:|:.:.|::...:.:..:||..:..|:..|.:.|.. .:|  .|..
  Fly   103 YCLAMTTSKFHLLELDMGLKNTAFEPEKHMALFVYRYSPTRSIRIYPHGNIYCQAFCKN--SARY 165

  Fly   119 GSRKFARILQKLGFPVKFMEYKLQNIVATVDLRFPIRLENLNHVHGQFSSYEPEMFPGLIYRMVK 183
            |.....:.|:.||:..:....|...:.||..:.|.:.|...:..:...:.|:...:|.|:|:|:.
  Fly   166 GLANILKELRYLGYAPRLRRLKTNAVNATFSVPFNLNLRQFHLENPVVTRYDTSKYPFLVYKMMG 230

  Fly   184 PRIVLLIFVNGKVVFTGAKSRKDIMDCLEAISPIL 218
            ..:.:.||..|.|:...|.:.:.....:..|.|.|
  Fly   231 TTVEIAIFPTGYVIVLFATTMEITKLAIAHILPTL 265

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Trf	NP_476939.1	PLN00062	49..224	CDD:177693	35/177 (20%)
		TBP_eukaryotes	50..221	CDD:239952	34/175 (19%)
Trf5	NP_608700.2	PLN00062	110..265	CDD:177693	31/156 (20%)
		TBP	191..267	CDD:278767	17/75 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG2101
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR10126
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.910