Protein Alignment Trf and Tbp

DIOPT Version :10

• Sequence 1: NP_476939.1
• Gene: Trf / 34102
• FlyBaseID: FBgn0010287
• Length: 224
• Species: Drosophila melanogaster
• Sequence 2: NP_038712.3
• Gene: Tbp / 21374
• MGIID: 101838
• Length: 316
• Species: Mus musculus
• Alignment Length: 196
• Identity: 113/196 - (57%)
• Similarity: 148/196 - (75%)
• Gaps: 2/196 - (1%)

  Fly    31 LQPQQPVALVEPKDAQHEI--RLQNIVATFSVNCELDLKAINSRTRNSEYSPKRFRGVIMRMHSP 93
            :.|..|:....|......|  :|||||:|.::.|:||||.|..|.||:||:||||..||||:..|
Mouse   120 MTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 184

  Fly    94 RCTALIFRTGKVICTGARNEIEADIGSRKFARILQKLGFPVKFMEYKLQNIVATVDLRFPIRLEN 158
            |.|||||.:||::||||::|.::.:.:||:||::||||||.||:::|:||:|.:.|::||||||.
Mouse   185 RTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEG 249

  Fly   159 LNHVHGQFSSYEPEMFPGLIYRMVKPRIVLLIFVNGKVVFTGAKSRKDIMDCLEAISPILLSFRK 223
            |...|.||||||||:||||||||:||||||||||:||||.||||.|.:|.:..|.|.|||..|||
Mouse   250 LVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK 314

  Fly   224 T 224
            |
Mouse   315 T 315

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Trf	NP_476939.1	TBP_eukaryotes	50..221	CDD:239952	105/170 (62%)
Tbp	NP_038712.3	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..21
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	104..135		3/14 (21%)
		PLN00062	139..315	CDD:177693	107/175 (61%)
		Repetitive region	142..218		43/75 (57%)
		Repetitive region	232..309		51/76 (67%)