Protein Alignment Trf and Tbp

DIOPT Version :9

• Sequence 1: NP_476939.1
• Gene: Trf / 34102
• FlyBaseID: FBgn0010287
• Length: 224
• Species: Drosophila melanogaster
• Sequence 2: NP_001004198.1
• Gene: Tbp / 117526
• RGDID: 67398
• Length: 318
• Species: Rattus norvegicus
• Alignment Length: 196
• Identity: 113/196 - (57%)
• Similarity: 148/196 - (75%)
• Gaps: 2/196 - (1%)

  Fly    31 LQPQQPVALVEPKDAQHEI--RLQNIVATFSVNCELDLKAINSRTRNSEYSPKRFRGVIMRMHSP 93
            :.|..|:....|......|  :|||||:|.::.|:||||.|..|.||:||:||||..||||:..|
  Rat   122 MTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 186

  Fly    94 RCTALIFRTGKVICTGARNEIEADIGSRKFARILQKLGFPVKFMEYKLQNIVATVDLRFPIRLEN 158
            |.|||||.:||::||||::|.::.:.:||:||::||||||.||:::|:||:|.:.|::||||||.
  Rat   187 RTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEG 251

  Fly   159 LNHVHGQFSSYEPEMFPGLIYRMVKPRIVLLIFVNGKVVFTGAKSRKDIMDCLEAISPILLSFRK 223
            |...|.||||||||:||||||||:||||||||||:||||.||||.|.:|.:..|.|.|||..|||
  Rat   252 LVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK 316

  Fly   224 T 224
            |
  Rat   317 T 317

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Trf	NP_476939.1	PLN00062	49..224	CDD:177693	108/176 (61%)
		TBP_eukaryotes	50..221	CDD:239952	105/170 (62%)
Tbp	NP_001004198.1	PLN00062	141..317	CDD:177693	107/175 (61%)
		TBP_eukaryotes	141..314	CDD:239952	105/172 (61%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG2101
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1219067at2759
OrthoFinder	1	1.000	-	-		FOG0001202
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100597
Panther	1	1.100	-	-	O	PTHR10126
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	7	6.820