DRSC/TRiP Functional Genomics Resources

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Protein Alignment Megf8 and NSP4

DIOPT Version :10

Sequence 1:NP_609180.3 Gene:Megf8 / 34099 FlyBaseID:FBgn0031981 Length:2892 Species:Drosophila melanogaster
Sequence 2:NP_188262.1 Gene:NSP4 / 820888 AraportID:AT3G16410 Length:619 Species:Arabidopsis thaliana


Alignment Length:282 Identity:60/282 - (21%)
Similarity:113/282 - (40%) Gaps:76/282 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1597 SLWMFGGYSPNHGPLNDFRQFDTKNSTWLQVTVESSTPEDRMPLGRYFHASEIYVKKQIIYIYGG 1661
            :|::|||...:. ..|.|..|||..:.|     :..||.:..|..|.||:  :...::.:|::||
plant   379 TLYVFGGRDASR-QYNGFYSFDTTTNEW-----KLLTPVEEGPTPRSFHS--MAADEENVYVFGG 435

  Fly  1662 IGANSQLLNDFWMFSIQNQRWSQIKVEVEPPEADYEVDVPPPLAGHTLTHIRYQEHESLILLGGL 1726
            :.|.:: ||....::|.:::|             :....|               .:||...||.
plant   436 VSATAR-LNTLDSYNIVDKKW-------------FHCSTP---------------GDSLTARGGA 471

  Fly  1727 SLN--KSRPLELWEFN---LD--------TGRWQQLAAVGARMPVLYGHTSVYHQET--NSVYLF 1776
            .|.  :.:...::.||   :|        ..:|.|:...|.|.    ...||:....  ..:.:|
plant   472 GLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRP----SERSVFASAALGKHIVIF 532

  Fly  1777 GG-YSTEPQSNL---------YALDLQKLSWTELPSF-RELNSPASLLPRARYFHSAVTT----E 1826
            || .:.:|.:::         :|||.:.|.|..|..| .|..:|:|     |.:.::.|.    :
plant   533 GGEIAMDPLAHVGPGQLTDGTFALDTETLQWERLDKFGGEEETPSS-----RGWTASTTATIGGK 592

  Fly  1827 HYMILYGGRTQPFNGTDVLIAY 1848
            ..::::||:....:..|.|..|
plant   593 KGLVMHGGKAPTNDRFDDLFFY 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Megf8NP_609180.3 CUB 33..141 CDD:238001
NanM <210..455 CDD:442289
KELCH repeat 228..268 CDD:276965
KELCH repeat 370..420 CDD:276965
KELCH repeat 425..476 CDD:276965
NanM 431..>630 CDD:442289
KELCH repeat 480..540 CDD:276965
EGF_3 1186..1222 CDD:463759
EGF_Lam 1257..1302 CDD:238012
EGF_Lam 1304..1354 CDD:238012
KELCH repeat 1585..1638 CDD:276965 12/40 (30%)
NanM 1596..1892 CDD:442289 60/282 (21%)
KELCH repeat 1642..1685 CDD:276965 11/42 (26%)
KELCH repeat 1760..1813 CDD:276965 16/65 (25%)
KELCH repeat 1817..1867 CDD:276965 7/36 (19%)
EGF_Lam 2299..2346 CDD:238012
EGF_Lam 2422..2487 CDD:238012
NSP4NP_188262.1 Jacalin 13..142 CDD:396138
PLN02193 150..619 CDD:177844 60/282 (21%)
KELCH repeat 315..363 CDD:276965
KELCH repeat 370..414 CDD:276965 12/40 (30%)
KELCH repeat 418..465 CDD:276965 12/77 (16%)
KELCH repeat 468..507 CDD:276965 7/38 (18%)
KELCH repeat 517..566 CDD:276965 11/48 (23%)
Blue background indicates that the domain is not in the aligned region.

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