DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Megf8 and atrn-1

DIOPT Version :10

Sequence 1:NP_609180.3 Gene:Megf8 / 34099 FlyBaseID:FBgn0031981 Length:2892 Species:Drosophila melanogaster
Sequence 2:NP_510443.5 Gene:atrn-1 / 181566 WormBaseID:WBGene00006432 Length:1269 Species:Caenorhabditis elegans


Alignment Length:1705 Identity:356/1705 - (20%)
Similarity:550/1705 - (32%) Gaps:659/1705 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly  1310 HGN----QDLGVCN--VSNGECYCKDNTQGLNCELCAPGYYGDPRGGGKCYYQCESRGILTNIGK 1368
            |.|    :.|..|:  ..||.|..|      .| :|:.|:||.         ||:.     ..|:
 Worm    31 HANFEFEKSLSSCDKPCYNGVCLNK------AC-VCSKGWYGS---------QCDH-----CFGR 74

  Fly  1369 SAIGSYQSYRS--PWGASLEVKECLWILQPKTLQAEKSLLQLEFQWQSLAMDCDENAVYIYDSLP 1431
            ..|....||.|  |...|...| |.|:::|     |.|...|:.:..|...:|..:.:||||   
 Worm    75 IRISDNASYISDGPLDYSPSAK-CTWLIEP-----ENSATPLKIRINSFFTECGWDYLYIYD--- 130

  Fly  1432 DLTGATQQNQLLAVVCAPYSSPRIIEARSSHVTVHYKQGSERRHFGFNALYSVMNCV-----AGS 1491
               |.:...:.||.:|....|.. ..|.|....||:.........|||..|....|.     .||
 Worm   131 ---GDSVYGKQLAALCGEQPSQE-FTAASGKALVHFFSDLAINLNGFNVSYESNRCAYNCSNHGS 191

  Fly  1492 CISPHICDAQQRCVCPAGYVGASCEIEIC-------PSNCNAKRMQGFCDTEYGRCICSNANYAG 1549
            |::       .:|.|..||.|.:||.::|       .|.|:    :|.|..  |||.|.:|...|
 Worm   192 CLN-------GKCDCEDGYKGLNCEYQVCQLSGKSTESPCH----EGQCVD--GRCECLSARVHG 243

  Fly  1550 ADCGTLVQRNHLVMTELFNTQLLSES---LEHLRKTIP--RFGH-SVNADRRGSLWMFGG--YSP 1606
            ..|...|                |.|   |.|.....|  :..| |:..|  ..:|..||  :..
 Worm   244 ETCQMPV----------------SSSVWDLIHPTNNAPTGKASHASIAID--DVVWSIGGEFFDG 290

  Fly  1607 NHGPLNDFRQFDTKNSTWLQVTVESSTPEDRMPLGRYFHASEIYVKKQIIYIYGGIGANSQL--- 1668
            :..| |:...::..:..|.:|.|...     ||..|:.|....|..|  :|::||: ..:|:   
 Worm   291 SSDP-NNIDVYNVTSRIWSKVEVSGD-----MPKPRFDHTVVKYKNK--LYMFGGV-TKTQVRHQ 346

  Fly  1669 -----LNDFWMFSIQNQRWSQIKVEVEPPEADYEVDVPPPLAGHTLTHIRYQEHESLILLGGLSL 1728
                 .|:.|:|.:.:::|:|   ::...|.  .:..|..:|||:...||   .|..::.|    
 Worm   347 TTQAATNELWIFDMGSKKWAQ---QIHKNET--IIAAPFAVAGHSAHVIR---SEMFVIFG---- 399

  Fly  1729 NKSRPL-----ELWEFNLDTGRWQQLAAVGARMPVLYG---HTSV-YHQET--NSVYLFGG--YS 1780
              ..||     .:..:|.:|..|    .|......:||   |::| |...|  .::.::||  ::
 Worm   400 --YNPLFGFMHHVQIYNFETEEW----TVANTSDHVYGRFKHSAVEYTTPTGATAILVYGGSMWN 458

  Fly  1781 TEPQSNLYALDLQKLSWTELPSFRELNSPASLLPRARYFHSAVTTEHYMILYGGRTQPFNG---- 1841
            .....:|...|.....|:.||     .|...|     |.|:|......|::.|||......    
 Worm   459 NTITDSLMQFDTSTKKWSNLP-----QSGVQL-----YLHAAAYLNGLMVVVGGRGSNVTAGSKS 513

  Fly  1842 ---TDVLIAYVYACNQW----------VRLTEDVELIGRVPASSYAEDMAIDPDTGAIYVIGGWD 1893
               ::::.:|..||.||          .|....|.:||:                 .:|.:||::
 Worm   514 ECFSNMVQSYDVACKQWSNMSTAPVDLKRFGHSVHVIGQ-----------------KLYALGGFN 561

  Fly  1894 G-------SSTHSHVTKITLPDDICQLWSNGKYQCRHYMGCSYCTIQNTYSYSSHCFS--HGRTP 1949
            |       :.:.:..:..|.||: |:|.::|. :| .::..|......|.||.|...|  ...||
 Worm   562 GKMKSDVWTLSPAKCSSATRPDE-CRLITDGT-KC-VFVDSSCVPFDPTVSYKSSFASMIKSSTP 623

  Fly  1950 -----CANHNGTLVVNNGAACDDDWMASRNCSSFATCGACLAAWPTHQEVAPVCHWCDDCGIRGR 2009
                 |.|....|             |.:.|.....|.:|.:        ...|.||..   ..:
 Worm   624 KSFDECTNTPLRL-------------ALKTCEEQTDCVSCAS--------KSGCGWCSS---GEQ 664

  Fly  2010 CVPAGVDC----GRRSAW--CNKELSVGVLGLCPLPQCYQLSCESCMLQPQCNWARNELGTVECI 2068
            |:|...:|    |..::|  |.:..||..:..|.:    :.:|.||.:.|.|.|...:..: .|:
 Worm   665 CLPNEQECVDGPGMLTSWEKCPQRNSVATMRPCNM----ENNCGSCRISPHCTWYPIDKAS-PCV 724

  Fly  2069 AKE--------------LVEKNQ----------YRVVESCPLPCHTYENCSLCLSQTPTQDHQEC 2109
            :||              |.::|:          :|....||:||....|||.|      .|.::|
 Worm   725 SKEDLIAVVYEYETKSVLADRNKFLSPSHFPSFFRNATECPMPCAQRNNCSDC------TDLEQC 783

  Fly  2110 KWSTMLNLCLTPSSQPLLCAGGVC------------GLVLEASELQRCPEPCHVYTQCSSCLEHA 2162
            .|....|.|:...:..|..|.|.|            ..|.:|..:     .|..:..|..|....
 Worm   784 MWCPSTNRCINLEAYTLSFAYGQCHSWVTSGSGSVINRVCQAESV-----VCEEHKTCGECQRDP 843

  Fly  2163 HCGWCAREGFNGDGIC----TEGALEHKQEHPSGSTCDLIYASWRNDSQLTHADVVSWHYVQCPA 2223
            .|||.|.:...|.|:|    :.|.||.|   |..||                     |:::.|||
 Worm   844 GCGWLADDSKTGLGLCIRGTSTGPLEPK---PENST---------------------WYFIDCPA 884

  Fly  2224 ENECINGHHNCDTVSEQCIDLDTAVGYKCVCAQGYREEQGACLPVCSQGCVRGNCVSPDQCQCDF 2288
                                                                             
 Worm   885 ----------------------------------------------------------------- 884

  Fly  2289 GYVGANCSIQCLCNGHSNCESS------SRLDICLKCHNNTMGEQCEKCQPLFVGNPREGHACQP 2347
                      |.|||||.|.:|      ..::.|..|.|:|.|..||:|.|.|.|:.|.|..|. 
 Worm   885 ----------CQCNGHSTCFTSVGSFPPVTIEKCQSCQNHTTGAHCERCAPGFYGDARNGGVCS- 938

  Fly  2348 CLDYCHGHSDVCVAYDADPAVFNMTRSELERILQEGPAYNATCLRCGNHTAGDRCDSCLTGYFRG 2412
                                                                             
 Worm   939 ----------------------------------------------------------------- 938

  Fly  2413 SEDLHKECRPCQCHGHGNICDPVTGEKCNC-ANNTESDATCTAGGGKNSAQLCWMVQCSKCRDSY 2476
                     ||.||...::||||:|: |.| ......|                  :|.||...|
 Worm   939 ---------PCDCHHQADMCDPVSGQ-CFCKTKGVTGD------------------RCDKCEAKY 975

  Fly  2477 AGNPTDGHQCYKQITVESRMCFDAKPIEECKSKPAALKPGQTVFFVIQPRFMNVDIRIIIDVTQG 2541
            .|||.:|..|:.::.|:                           |:.                  
 Worm   976 VGNPRNGTPCFYELAVD---------------------------FIF------------------ 995

  Fly  2542 ELDVFMSPQDDSFIVETNETTGYHEIFLDNRYNWGPKIKREHPLNVALPRHDNVTIQ-KLFSPER 2605
               .|....||    :.|.|:   ||:|               .:|...:..:||.| ...||: 
 Worm   996 ---TFKLRSDD----KDNHTS---EIYL---------------YSVPYKKDTDVTFQISCESPK- 1034

  Fly  2606 RIGGGGLGGGGGERIGANTYYVPQLQD----------CKSHGGHN-FIVKDQHAKDLSTHVTLNH 2659
                    |.....:...:.||..|.|          |.|.|... ::..|:...          
 Worm  1035 --------GNALVALNMTSSYVNGLADKSQAMMVDTICDSKGFRRVYVASDKGYP---------- 1081

  Fly  2660 CNTLLRLFGLKNRLVLTLPQHAHNLSATRFFIALRASSGPEPSYGSVVFRQDQLHIDLFVFFSVF 2724
                   ||         |.     |.|.||:  |..:...|....|.|.|.. .|:..:||.:|
 Worm  1082 -------FG---------PD-----SNTTFFV--RVYNFNTPVQIVVSFAQSP-PINWVLFFVIF 1122

  Fly  2725 FSCFFLFLAVCVIVWKVKQAADLRRARRQHVVEMLHLAKRPFAQIFLASNGLDMDSPQPTSSSSS 2789
            .:||.:.|.|..::|.:|...:..|..::.:.|:.|:|.|||     ||..:::           
 Worm  1123 AACFIVLLVVAGLLWMIKVRIEAYRRNQRRIDEIEHMASRPF-----ASTKMEL----------- 1171

  Fly  2790 ARAMRQRARQALLLQEQSAGDSQSVMHHSTRRQSSRIMMVAIEPTFDNLAAVGTVFISLP--GRS 2852
                      ::|.|..|||....               ::|||..:..|.|.|:.:.||  |::
 Worm  1172 ----------SMLSQFSSAGGPTP---------------LSIEPCSNYRAGVFTLAVRLPTGGKA 1211

  Fly  2853 RAP---LSIALGSTL 2864
            ..|   ..:|:.|:|
 Worm  1212 VTPSGTSGLAVASSL 1226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Megf8NP_609180.3 CUB 33..141 CDD:238001
NanM <210..455 CDD:442289
KELCH repeat 228..268 CDD:276965
KELCH repeat 370..420 CDD:276965
KELCH repeat 425..476 CDD:276965
NanM 431..>630 CDD:442289
KELCH repeat 480..540 CDD:276965
EGF_3 1186..1222 CDD:463759
EGF_Lam 1257..1302 CDD:238012
EGF_Lam 1304..1354 CDD:238012 13/49 (27%)
KELCH repeat 1585..1638 CDD:276965 11/55 (20%)
NanM 1596..1892 CDD:442289 71/335 (21%)
KELCH repeat 1642..1685 CDD:276965 12/50 (24%)
KELCH repeat 1760..1813 CDD:276965 14/60 (23%)
KELCH repeat 1817..1867 CDD:276965 15/66 (23%)
EGF_Lam 2299..2346 CDD:238012 21/52 (40%)
EGF_Lam 2422..2487 CDD:238012 20/65 (31%)
atrn-1NP_510443.5 CUB 71..179 CDD:238001 33/120 (28%)
NanM 260..572 CDD:442289 77/367 (21%)
KELCH repeat 269..316 CDD:276965 11/54 (20%)
KELCH repeat 320..379 CDD:276965 14/66 (21%)
KELCH repeat 382..422 CDD:276965 12/52 (23%)
KELCH repeat 485..537 CDD:276965 13/56 (23%)
PSI 640..686 CDD:396154 11/56 (20%)
PSI 767..816 CDD:396154 15/54 (28%)
PSI 830..883 CDD:396154 18/76 (24%)
EGF_Lam 884..937 CDD:238012 22/127 (17%)
EGF_Lam 939..985 CDD:238012 20/64 (31%)
Blue background indicates that the domain is not in the aligned region.

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