DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tg and Tgm4

DIOPT Version :10

Sequence 1:NP_609174.1 Gene:Tg / 34093 FlyBaseID:FBgn0031975 Length:776 Species:Drosophila melanogaster
Sequence 2:NP_073204.2 Gene:Tgm4 / 64679 RGDID:620785 Length:667 Species:Rattus norvegicus


Alignment Length:716 Identity:233/716 - (32%)
Similarity:356/716 - (49%) Gaps:86/716 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 SSAVLGVLKVDLCLEDNHEEHHTSHFYAAAAKEALVVRRGEPFRLKIHFNRDYSPSKDAISFIFT 114
            |..:|.|..|:|..:.|...|||..:..    :.||:|||:.|.||:..||... |.|.:..|| 
  Rat     3 SRNMLVVYSVNLEKKLNAAAHHTIEYQT----QKLVLRRGQIFSLKVMLNRPLQ-SHDELKLIF- 61

  Fly   115 VADDTKPSPGHG----TLNALVPHDGIDYLGDTLEWGAGIESHEGQTLTVLIKPPSTCPVTEWKL 175
                   :.||.    |:. |.|.......|    |...|....|..:.:.:...:...|..:.:
  Rat    62 -------NTGHNMPFYTVE-LDPMTSYRSKG----WQVKIAKQSGVEVVLNVISAADAVVGRYTM 114

  Fly   176 DIDTKLLGDGSRSYPLPLPIYVLFNPWCPDDQVYLEDRDQRKEYVMHDTTLIWRGSYNRLRPSVW 240
            :::....|          ..::||||||.||.|::...:.|.|||::||..::.|...:::...|
  Rat   115 NVNEFDAG----------VFFLLFNPWCSDDSVFMASEEDRAEYVLNDTGYMYMGFAKQIKEKPW 169

  Fly   241 KIGQFERHVLECSLKVLGTVGRIPPAYRGDPVRVARALSALVNSVDDDGVLLGNWSEDFSGGVAP 305
            ..||||:::|.|..::|   ..:.|.....||.|:||:..::.:.::.|||:|||:.|:|.|.||
  Rat   170 TFGQFEKYILNCCFRLL---THLEPKEMQSPVLVSRAICTMMCAANNFGVLVGNWTGDYSNGTAP 231

  Fly   306 TKWTGSVEILQQFYKTQKSVKFAQCWNFSGVLTTIARSLGIPSRIITCYSSAHDTQASLTVDVFI 370
            ..|..||.||||.|.|:..|:|.|||.|||||||..|::|||:|.:|.:.|||||:.:|.||:::
  Rat   232 YVWASSVPILQQHYITRMPVRFGQCWVFSGVLTTALRAVGIPARSVTNFESAHDTEKNLRVDIYL 296

  Fly   371 DANNKKLDAETTDSIWNYHVWNELWMQRPDLGVGEHGTFDGWQVVDATPQEASDNMYRVGPASVA 435
            |.:.|.:...|.||:||:|||.:.||:|.||..|.    |||||:|:||||.|:..:|:||:.|:
  Rat   297 DESGKTIPHLTKDSVWNFHVWTDAWMKRQDLPQGH----DGWQVLDSTPQEISEGQFRIGPSPVS 357

  Fly   436 AVKNGDILRPFDGGFVFAEVNADKLYW--RYNGPSQPLKLLRKDTLAIGHLISTKAVLKWEREDI 498
            |::.|.:...:|..|||.|||.||..|  :.|...:...|:..:|.:||..||||.|.:..|:||
  Rat   358 AIRQGLVQIMYDTTFVFTEVNGDKYIWLVKQNQEREKNVLIAVETASIGKNISTKMVGENRRQDI 422

  Fly   499 TDTYKHAERSEEERSTMLKALKQSRHAFSRYYLNDNFNDIEFDME-LKDDIKIGQSFSVVLKVSN 562
            |..||..|.|.|||..|.||        |....:|..|.....:. |::.:::|...::.:.:..
  Rat   423 TLHYKFPEGSPEERKAMEKA--------SGKRPDDKLNSRTLHISVLQNSVELGHPINLTIVLKR 479

  Fly   563 KSESRTHMATGQ---ISC--DAVLYTG-----VGAVEVKTLGF-----ELELEPKSSDYV-RMEV 611
            |:      ||.|   |||  |...|||     :|.:: ||:..     |:.|...||.|: ::.:
  Rat   480 KT------ATPQNVNISCSLDLQTYTGNKKTNLGVIQ-KTVQIQGQESEVSLSMDSSFYIYKLGM 537

  Fly   612 IFEEYYDKLSSQAAFQISAAAKVKDTD--YDYYAQDDFRVRKPDIKFQLGEAAIVAQKELDVILR 674
            :.:|...|....|....|......||.  :.|.|   |.|..|        :.....:.|.:...
  Rat   538 VDDEMVIKGFIIAEIVDSGERVATDTTLCFLYSA---FSVEMP--------STSKVNQPLTITCN 591

  Fly   675 LENPLPIPLHKGVFTVEGPGIEQPLKFKIAEIPVGGTAAATFKYTPPYAGRGTMLAKFTSKELDD 739
            .:|.|||||....|:||..|:.....::...:|.|.|.....:.||...|....:.||.|:::.:
  Rat   592 FKNTLPIPLTNIKFSVESLGLNNMKSWEQETVPPGKTINFQIECTPVKTGPRKFIVKFISRQVKE 656

  Fly   740 V 740
            |
  Rat   657 V 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TgNP_609174.1 Transglut_N 58..180 CDD:459971 30/125 (24%)
TGc 324..419 CDD:214673 48/94 (51%)
Transglut_C 538..644 CDD:460002 28/124 (23%)
Transglut_C 652..750 CDD:460002 22/89 (25%)
Tgm4NP_073204.2 Transglut_N 11..117 CDD:459971 30/123 (24%)
TGc 249..341 CDD:214673 48/95 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 430..449 9/26 (35%)
Transglut_C 571..667 CDD:460002 25/98 (26%)

Return to query results.
Submit another query.