DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tg and F13a1

DIOPT Version :9

Sequence 1:NP_609174.1 Gene:Tg / 34093 FlyBaseID:FBgn0031975 Length:776 Species:Drosophila melanogaster
Sequence 2:NP_067730.2 Gene:F13a1 / 60327 RGDID:621495 Length:732 Species:Rattus norvegicus


Alignment Length:735 Identity:250/735 - (34%)
Similarity:366/735 - (49%) Gaps:86/735 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LGVLKVDLCLE---DNHEEHHTSHFYAAAAKEALVVRRGEPFRLKIHFNRDYSPSKDAISFIFTV 115
            |.|..|.|..|   .|..:|||..:    ....|:||||:.|.::|.|||.|.|.||.....:.:
  Rat    46 LNVTAVHLFKERWDSNKIDHHTDKY----DNNKLIVRRGQTFYIQIDFNRPYDPRKDLFRVEYVI 106

  Fly   116 ADDTKPSPGHGTLNALVPHDGIDYLGDTLEWGAGIESHEGQTLTVLIKPPSTCPVTEWKL----- 175
            .  ..|....||   .:|...:..| .:.:|||.:..:|.:::.:.::....|.|.::::     
  Rat   107 G--RYPQENKGT---YIPVPVVTEL-QSGKWGAKVIMNEDRSVRLSVQSSPECIVGKFRMYVAVW 165

  Fly   176 ------------DIDTKLLGDGSRSYPLPLPIYVLFNPWCPDDQVYLEDRDQRKEYVMHDTTLIW 228
                        :.||                |:||||||.:|.|||:|..:|:|||::|..:|:
  Rat   166 TPYGILRTQRDPETDT----------------YILFNPWCEEDAVYLDDEKEREEYVLNDIGVIF 214

  Fly   229 RGSYNRLRPSVWKIGQFERHVLECSLKVLGTVGRIPPAYRGDPVRVARALSALVNSVDDDGVLLG 293
            .|.:|.::...|..||||..:|:..|.|:.. ..:..:.||:|::|:|..||:||:.||:|||:|
  Rat   215 HGDFNDIKSRSWSYGQFEDGILDACLYVMDK-AEMDLSGRGNPIKVSRVGSAMVNAKDDEGVLVG 278

  Fly   294 NWSEDFSGGVAPTKWTGSVEILQQFYKTQKSVKFAQCWNFSGVLTTIARSLGIPSRIITCYSSAH 358
            :|...::.|:.|:.|||||:||.::..::..|::.|||.|:||..|..|.||||:|:||.|.|||
  Rat   279 SWDNVYAYGIPPSAWTGSVDILLEYRSSETPVRYGQCWVFAGVFNTFLRCLGIPARVITNYFSAH 343

  Fly   359 DTQASLTVDVFIDANNKKLDAETTDSIWNYHVWNELWMQRPDLGVGEHGTFDGWQVVDATPQEAS 423
            |..|:|.:|:|::.:.......|.||:||||.|||.||.||||.||    |.|||.||:||||.|
  Rat   344 DNDANLQMDIFLEEDGSVSSKLTKDSVWNYHCWNEAWMTRPDLPVG----FGGWQAVDSTPQENS 404

  Fly   424 DNMYRVGPASVAAVKNGDILRPFDGGFVFAEVNADKLYWRYNGPSQPLKLLRK-DTLAIGHLIST 487
            |.|||.|||||.|||:|.:...||..|||||||:|.:|  .........::.. |...||.||.|
  Rat   405 DGMYRCGPASVQAVKHGHVCFQFDAPFVFAEVNSDLVY--ITAKKDGTHVVENVDATHIGKLIVT 467

  Fly   488 KAVLKWEREDITDTYKHAERSEEERSTMLKALKQSRHAFSRYYLNDNFN-----------DIEFD 541
            |.:.....:|||||||..|..||||..:..||        .|......|           |:.||
  Rat   468 KEIGGDGMQDITDTYKFQEGQEEERLALETAL--------MYGAKKTLNTEGVVKSRSDVDMNFD 524

  Fly   542 MELKDDIKIGQSFSVVLKVSNKSESRTHMATGQISCDAVLYTGVGAVEVKTLGFELELEPKSSDY 606
            :|   :..:|:.|.|.:...|.| |..:.....:|.:...||||...|.||..||:.|:|.|.: 
  Rat   525 VE---NAVLGKDFRVTITFQNNS-SNLYTILAYLSGNITFYTGVSKKEFKTESFEVTLDPLSLE- 584

  Fly   607 VRMEVIFE--EYYDKLSSQAAFQISAAAKVKDTDYDYYAQDDFRVRKPDIKFQLGEAAIVAQKEL 669
             :.||:..  ||...|..|........|::.:|......|....:..|.:..::...|:|..   
  Rat   585 -KKEVLIRAGEYMSYLLEQGLLHFFVTARINETRVVLAKQKSIVLTIPKVTIKVRGTAMVGS--- 645

  Fly   670 DVILRLE--NPLPIPLHKGVFTVEGPGIEQPLKFKIAEIPVGGTAAATFKYTPPYAGRGTMLAKF 732
            |:::.:|  |||...|......:||||:.:|.:....||....|........|..:|...::|..
  Rat   646 DMVVTVEFTNPLKETLKNVWLHLEGPGVMRPKRKMFREIRPNATVQWEEVCQPWVSGHRKLIASM 710

  Fly   733 TSKELDDVDGYRHYEIEPRP 752
            ||..|..|.|....:|..||
  Rat   711 TSDSLRHVYGELDLQIRRRP 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TgNP_609174.1 Transglut_N 56..179 CDD:279240 33/142 (23%)
TGc 324..419 CDD:214673 49/94 (52%)
Transglut_C 538..644 CDD:279295 30/107 (28%)
Transglut_C 652..750 CDD:279295 26/99 (26%)
F13a1NP_067730.2 Transglut_N 47..164 CDD:279240 33/126 (26%)
YebA <280..408 CDD:224224 65/131 (50%)
TGc 309..400 CDD:214673 49/94 (52%)
Transglut_C 519..623 CDD:279295 31/109 (28%)
Transglut_C 631..726 CDD:279295 25/97 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354562
Domainoid 1 1.000 129 1.000 Domainoid score I5126
eggNOG 1 0.900 - - E1_2CD5G
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 452 1.000 Inparanoid score I1557
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D153729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm45852
orthoMCL 1 0.900 - - OOG6_102867
Panther 1 1.100 - - O PTHR11590
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1344
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.760

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