DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tg and tgm3l.8

DIOPT Version :10

Sequence 1:NP_609174.1 Gene:Tg / 34093 FlyBaseID:FBgn0031975 Length:776 Species:Drosophila melanogaster
Sequence 2:XP_002935578.1 Gene:tgm3l.8 / 594880 XenbaseID:XB-GENE-5955394 Length:694 Species:Xenopus tropicalis


Alignment Length:714 Identity:223/714 - (31%)
Similarity:357/714 - (50%) Gaps:57/714 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 AVLGVLKVDLCLEDNHEEHHTSHFYAAAAKEALVVRRGEPFRLKIHFNR-DYSPSKDAISFIFTV 115
            :.|.:..::|....|...||||.|.:.    ...:|||:|..:.::||| .|:....||..    
 Frog     2 SALQLKSINLQKATNVANHHTSGFDST----VFALRRGQPITVNLNFNRVFYTGESVAIDV---- 58

  Fly   116 ADDTKPSPG-HGTLNALVPHDGIDYLGDTLEWGAGIESHEGQTLTVLIKPPSTCPVTEWKLDIDT 179
              :|.|||. .....|::|   :....:...|.|......|.|:.|:|..|.......:|:....
 Frog    59 --ETGPSPSVPKNTKAVMP---VSKYANPQTWSASSGQSTGATMPVIINIPVNAIPGRYKMTAHL 118

  Fly   180 KLLGDGSRSYPLPLPIYVLFNPWCPDDQVYLEDRDQRKEYVMHDTTLIWRGSYNRLRPSVWKIGQ 244
            ...|..:.||.|| ..:||||||..|||||:.:..:|.|||:::..:|:||:.|.:....|...|
 Frog   119 ARSGRTTASYRLP-EFFVLFNPWNQDDQVYMSNEAERNEYVLNEYGVIFRGNANNISRLAWDYAQ 182

  Fly   245 FERHVLECSLKVLGTV--GRIPP----AYRGDPVRVARALSALVNSVDDDGVLLGNWSEDFSGGV 303
            ||..:|:....:|.:.  .:..|    :.|.||:.|.|.|||:||..||:|||.|.|..|:|.||
 Frog   183 FEGDMLDICFLMLDSCLEHKTDPITDISNRYDPIYVGRVLSAIVNINDDNGVLYGRWDNDYSDGV 247

  Fly   304 APTKWTGSVEILQQFYKTQKSVKFAQCWNFSGVLTTIARSLGIPSRIITCYSSAHDTQASLTVDV 368
            :||.|:||..||:. ::....||:.|||.|:|||.|:.|.||||:|:|:.:.||||..::|.::.
 Frog   248 SPTSWSGSARILRS-WRDNGPVKYGQCWVFAGVLCTVLRCLGIPARVISNFESAHDGNSNLLIEE 311

  Fly   369 FIDANNKKLDAETTDSIWNYHVWNELWMQRPDLGVGEHGTFDGWQVVDATPQEASDNMYRVGPAS 433
            :.|....:|.  :.||:||:|.|||.|..|.|||    ..:.|||::|:||||.|..:|.:||.|
 Frog   312 YFDEKGTQLG--SPDSVWNFHCWNEAWFTRGDLG----DNYGGWQILDSTPQEPSGGIYCLGPTS 370

  Fly   434 VAAVKNGDILRPFDGGFVFAEVNAD-KLYWRYNGPSQPLKLLRKDTLAIGHLISTKAVLKWERED 497
            :.|||.||:...:|..|||.|||:| |.:.:|: ..:||:.:..||.::|..||||||....|:|
 Frog   371 LKAVKQGDVTLDYDTTFVFGEVNSDRKRFIKYS-DGRPLQNVYTDTASVGQFISTKAVGSNNRQD 434

  Fly   498 ITDTYKHAERSEEERSTMLKA----LKQSRHAFSRYYLNDNFN----DIEFDMELKDDIKIGQSF 554
            :|:.||..|.|.:||.|..||    |.......:...:.:...    :|....:|....:||...
 Frog   435 VTNGYKDPEGSGKERETFNKARTTLLSLGIATMAARSVQEEPKGPKPEITGSFKLSGQPQIGDDV 499

  Fly   555 SVVLKVSNKSESRTHMATGQISCDAVLYTGVGAVEVKTLGFELELEPKSSDYVRMEVIFEEYYDK 619
            .|:..:.|.:.:|.::.. :.:..|::|....:.|:.|....:.|.....:.|.:.|.:.:|...
 Frog   500 VVIFNIKNPTSARKNIKL-KFTVTAIVYNRAVSKEILTNNQPVTLAANKEESVNLTVEYSKYQGA 563

  Fly   620 LSSQAAFQISA-------AAKVKDTDYDYYAQDDFRVRKPDIKFQLGEAAIVAQKELDVILRLEN 677
            |:.....|:.|       ||.:.||        ...::.|.::.::.:.|.| .|.|.|.:..:|
 Frog   564 LTPDNMIQVVAVCEEENGAALLTDT--------VITLKNPPMQLKVPDKAAV-NKALSVEVIFQN 619

  Fly   678 PLPIPLHKGVFTVEGPG-IEQPLKFKIAEIPVGGTAAATFKYTPPYAGRGTMLAKFTSKELDDV 740
            .:...|...:.|:||.| |:..:|..:.::......:.....||..:|...:.|..::.:|.||
 Frog   620 TIGDRLKNCLITLEGSGLIKDEVKVPVPDLKPSEKYSTKVVITPYKSGERNLSANLSADKLSDV 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TgNP_609174.1 Transglut_N 58..180 CDD:459971 31/123 (25%)
TGc 324..419 CDD:214673 41/94 (44%)
Transglut_C 538..644 CDD:460002 22/112 (20%)
Transglut_C 652..750 CDD:460002 21/90 (23%)
tgm3l.8XP_002935578.1 Transglut_N 7..117 CDD:459971 31/122 (25%)
TGc 267..356 CDD:214673 41/94 (44%)
Transglut_C 483..574 CDD:460002 17/91 (19%)
Transglut_C 595..693 CDD:460002 21/90 (23%)

Return to query results.
Submit another query.