DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tg and tgm5l

DIOPT Version :9

Sequence 1:NP_609174.1 Gene:Tg / 34093 FlyBaseID:FBgn0031975 Length:776 Species:Drosophila melanogaster
Sequence 2:NP_001313420.1 Gene:tgm5l / 565984 ZFINID:ZDB-GENE-110411-176 Length:685 Species:Danio rerio


Alignment Length:718 Identity:215/718 - (29%)
Similarity:336/718 - (46%) Gaps:150/718 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 LKVDLCLEDNHEEHHTSHFYAAAAKEALVVRRGEPFRLKIHF-NRDYSPSKDAISFIFTVADDTK 120
            :.|:|....|..:|.|.    ..:..:||||||:||.:.|:: .|.|.|.::.:.|||.:     
Zfish     7 VSVNLQPVQNQLQHRTD----GLSSGSLVVRRGQPFTVTINYAGRPYDPLREKLQFIFIL----- 62

  Fly   121 PSPGHGTLNALVPHDGIDYLG--DTLEWGA----GIESHEG-QTLTVLIKPPSTCPVTEWKLDI- 177
                 |.|:..||   :...|  .:.:|.|    |:.:..| :.|||.:..|::..:..:.|.: 
Zfish    63 -----GPLSVEVP---VSSYGQPSSSKWSAVLERGLPNPSGSRALTVSLSSPASSSIGVYTLQLT 119

  Fly   178 -------DTKLLGDGSRSYPLPLPIYVLFNPWCPDDQVYLEDRDQRKEYVMHDTTLIWRGSYNRL 235
                   .|.|||.          ..:|.||||..|.|:|:..|.|.|||..|..|:::|:...:
Zfish   120 VQTRSSTKTHLLGQ----------FTLLANPWCQADSVFLQSEDLRNEYVRSDFGLLFKGTPGNV 174

  Fly   236 RPSVWKIGQFERHVLECSLKVLGTVGRIPP----------AYRGDPVRVARALSALVNSVDDDGV 290
            ....|..||:|:.:|:..:|:|    ::.|          ..|..|:.:.|.:||:||..||.||
Zfish   175 VSRPWSFGQYEKGLLDICMKLL----QLSPQSQTDMKRDLLNRSSPIYIGRVISAMVNCQDDKGV 235

  Fly   291 LLGNWSEDFSGGVAPTKWTGSVEILQQFYKTQKS-VKFAQCWNFSGVLTTIARSLGIPSRIITCY 354
            |:||||.|:|.||.|:.|:||.:||:.:.:||.| ||:||||.|:.|:.|:.|:||||:|::|.:
Zfish   236 LMGNWSGDYSDGVNPSVWSGSADILRMWSETQFSPVKYAQCWVFAAVMCTVMRALGIPTRVVTNF 300

  Fly   355 SSAHDTQASLTVDVFIDANNKKLDAETTDSIWNYHVWNELWMQRPDLGVGEHGTFDGWQVVDATP 419
            :|||||..::.::.:.....:||.. ..|||||:|||.|.||:|||||    .|:|||||:|.||
Zfish   301 NSAHDTNGNMVIEEYYTEMGEKLSI-GRDSIWNFHVWVESWMKRPDLG----QTYDGWQVLDPTP 360

  Fly   420 QEASDNMYRVGPASVAAVKNGDILRPFDGGFVFAEVNAD---------KLYWRYNGPSQPLKLLR 475
            ||.|..|||.|||:|.|:....:...:|..||:||||||         |:.    |.|       
Zfish   361 QEESAGMYRCGPAAVKAIHEQKVDAAYDVPFVYAEVNADVRTVIIRDRKIL----GVS------- 414

  Fly   476 KDTLAIGHLISTKAVLKWEREDITDTYKHAERSEEERSTMLKALKQSRHAFSRYYLNDNFNDIE- 539
            .|...:|.||.||........|||..||            .:.:..|.:|||.        |:. 
Zfish   415 VDKERVGALICTKRPGAMTMLDITSEYK------------TEMVLSSAYAFSA--------DVRG 459

  Fly   540 --------------FDMELKDDIKIGQS--FSVVLKVSNKSESRTHMATGQISCDAVLYTGVGAV 588
                          ..::|.....||:|  ||:::             |.|.|...:|.....|.
Zfish   460 GEAAPARVAPQGLAVSLQLLKTPIIGESIAFSIII-------------TNQASIPKLLRAHANAQ 511

  Fly   589 EVK----TLG------FELELEPKSSDYVRMEVIFEEYYDKLSSQAA-FQISAAAKVKD--TDYD 640
            ..:    ..|      .||::.|..:..:..|:.|.||  ||..... :.::.|..|:|  :...
Zfish   512 NKEYHRNPFGSFWEKHHELKIGPSETVTINQEISFNEY--KLKQVLEDYLVNLAVVVEDVKSQER 574

  Fly   641 YYAQDDFRVRKPDIKFQLGEAAIVAQKELDVILRLENPLPIPLHKGVFTVEGPG-IEQPLKFKIA 704
            ..|.::|.:..|.:..|:....::.......::...||..:.: .|..||.|.| :|:.::.:::
Zfish   575 VLASEEFNIHSPALSIQIQNENVIVNSPQVAMVTFTNPFDVAV-TGELTVAGSGLLEEKIQIRVS 638

  Fly   705 EIP 707
            ..|
Zfish   639 MQP 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TgNP_609174.1 Transglut_N 56..179 CDD:279240 34/137 (25%)
TGc 324..419 CDD:214673 47/95 (49%)
Transglut_C 538..644 CDD:279295 24/135 (18%)
Transglut_C 652..750 CDD:279295 11/57 (19%)
tgm5lNP_001313420.1 Transglut_N 5..120 CDD:279240 34/129 (26%)
TGc 270..360 CDD:214673 46/94 (49%)
YebA <272..368 CDD:224224 50/100 (50%)
Transglut_C 472..577 CDD:279295 24/119 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D153729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11590
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

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